Clone Sequence Records
MXO02466.3prime Sequence
883 bp (850 high quality bases) assembled on 2006-12-21
> MXO02466.3prime
ATGGTCTAGAAAGCTTGCGTGTATCAGCTTCTGGGATCGAGCCAGATCCA
GTTGCGCCGAGGAGACGCTCGTTAGACCCTCGCGCACTGTGCTGAGGTTC
TCCTTCCATGCCTGCAGCAAATCGCGAAGCTGCTCCCATTGTGGTGCTCC
AAAGGTTCGGTGCATTGTCGATGAGATGTGTACCTTTTGATTGGCCTGAT
CTAGTCGTGCGCGTACCAGCTTTGTTTTCAGCACCTCGATGACGAAGGGC
TCCACCTCGTCTTCGTTGATCTGCAGCTCCTTGGTAAGCGTTTCGAATGT
CATCTCCGGGCTGCTCTCGGCCAGCTGCATGAAGGTCAGCAGACGCATCT
TCTTCATGTTCTGCTCATGGTTCAATCCTTGCGAGTTGACAAACTCCCTG
TGATCCTCGTAGAACTGCACGTACGCTGGCAGCTTCTCGGACACGAAGAT
GGACAGCAGGTCGTGGATGAGGTCGCCTTCCAAAAAGCGCACAGGCTTCA
GCGACAGCAGAGGATCCAGCAGGAATGTATTGGGGTCGGCCAAGGCAGTC
ACAATGCACTTCATGGCATCCTCACGGGCAACACAAGCATTGTCCGCCGT
GTAGGTGCCCAGCAGCTCAATCATAACCTTGGAAGACAGCTCCAGGTTGG
TGTCCTTGGTCACGTCGTGCAGCAGGCGGTACAGCTTCTGCATCTGTTCC
GACGAAGGTGGGCAGTTGGCAAACTGGGATTTGAGCTGATCCACACCTGA
GAAGACCTCCAGCACCTGTTCGCACTGCTTGGCCACCTGGACCAGGTGGT
AGTACACATGGTAGCGTAAGGGAGAGGCGGTGTCCAGGTTGTTGAACAGA
CGCCACAACGACTGGAGGCACACCTTTGCCAAT
MXO02466.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8309-PA | 1164 | CG8309-RA | 304..1161 | 876..19 | 4265 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango7-RB | 1386 | CG8309-RB | 387..1251 | 883..19 | 4280 | 99.7 | Minus |
Tango7-RA | 1590 | CG8309-RA | 591..1455 | 883..19 | 4280 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14163201..14164065 | 19..883 | 4280 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:48 has no hits.
MXO02466.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:00 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8309-PA | 297..1164 | 18..883 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:02 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8309-PA | 297..1164 | 18..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:30 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango7-RA | 591..1460 | 13..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:02 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango7-RA | 591..1460 | 13..883 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:02 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14163196..14164065 | 13..883 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:30 Download gff for
MXO02466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10050701..10051570 | 13..883 | 99 | | Plus |
MXO02466.5prime Sequence
797 bp (796 high quality bases) assembled on 2006-12-21
> MXO02466.5prime
CAGTCGACATGACTTCGCATCCGGTTTTCATAGACCTGTCCCTGGACGAG
CAGGTGCAAGAGCTGCGCAAGTATTTCAAGAAGCTGGGAGCCGAAATCTC
ATCGGAGAAGTCCAATAAAGGTGTGGAGGATGATTTGCACAAGATCATCG
GCGTCTGCGACGTTTGCTTTAAGGATGGTGAGCCCTCGCAGATTGATGGA
ATTCTAAACAGCATTGTGTCCATCATGATCACGATACCCCTGGATCGCGG
TGAGAACATTGTCCTGGCCTACTGCGAGAAGATGACCAAGGCTCCCAATC
TTCCATTGGGCAAGGTGTGCCTTCAGTCGTTGTGGCGTCTGTTCAACAAC
CTGGACACCGCCTCTCCCTTACGCTACCATGTGTACTACCACCTGGTCCA
GGTGGCCAAGCAGTGCGAACAGGTGCTGGAGGTCTTCTCAGGTGTGGATC
AGCTCAAATCCCAGTTTGCCAACTGCCCACCTTCGTCGGAACAGATGCAG
AAGCTGTACCGCCTGCTGCACGACGTGACCAAGGACACCAACCTGGAGCT
GTCTTCCAAGGTTATGATTGAGCTGCTGGGCACCTACACGGCGGACAATG
CTTGTGTTGCCCGTGAGGATGCCATGAAGTGCATTGTGACTGCCTTGGCC
GACCCCAATACATTCCTGCTGGATCCTCTGCTGTCGCTGAAGCCTGTGCG
CTTTTTGGAAGGCGACCTCATCCACGACCTGCTGTCCATCTTCGTGTCCG
AGAAGCTGCCAGCGTACGTGCAGTTCTACGAGGATCACAGGGAGTTT
MXO02466.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8309-PA | 1164 | CG8309-RA | 1..789 | 9..797 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tango7-RB | 1386 | CG8309-RB | 90..879 | 8..797 | 3950 | 100 | Plus |
Tango7-RA | 1590 | CG8309-RA | 294..1083 | 8..797 | 3950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14163573..14164137 | 797..233 | 2825 | 100 | Minus |
2R | 25286936 | 2R | 14164191..14164372 | 233..52 | 910 | 100 | Minus |
2R | 25286936 | 2R | 14164485..14164532 | 55..8 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:59 has no hits.
MXO02466.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:02 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8309-PA | 1..789 | 9..797 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:02 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8309-PA | 1..789 | 9..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:27 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango7-RA | 294..1083 | 8..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:38 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tango7-RA | 294..1083 | 8..797 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:38 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14163573..14164136 | 234..797 | 100 | <- | Minus |
2R | 14164191..14164370 | 54..233 | 100 | <- | Minus |
2R | 14164487..14164532 | 8..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:27 Download gff for
MXO02466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10051078..10051641 | 234..797 | 100 | <- | Minus |
arm_2R | 10051696..10051875 | 54..233 | 100 | <- | Minus |
arm_2R | 10051992..10052037 | 8..53 | 100 | | Minus |