MXO02468.3prime Sequence
849 bp (778 high quality bases) assembled on 2006-12-21
> MXO02468.3prime
ATGGTCTAGAAAGCTTGCAAAGGTTATTGGTTCGATGGGAACAGTGCATT
CGCTATACATGACGCGGTACATGGCCATTTCAGAGATGCCATGGTAGTGG
ACAAAAGCGGCCGCAATGACCAGTATGTGGAATATTTGATGTGATTGACC
CCAAATGTCAAACTTTCCAGGGAACCAGCGTTCGGGAACACGGAGGGCGT
ACAGCAGTGCGCCCAGAATGTAGAGGAGGCCCATCAGAATTAGCCATCCC
AGACTGGCGCGGCTCATCTGGCTGAACCAGCCCTCCATGATGCTGTAGTG
AATAGCTGGAATCACACCCGACAGGCCAAAGCTCATAAATACGCCAGCGC
GCAAGGGACGAAGTGCCGGCTCCGAAAACTTGTCCCATAGCGAGACCACG
ATGGAGAGGATGCCCAGAATGCTAACAACGGATAGGTATATCACCTTTGG
CTGGTAATGACAGTAGAAGCCATAGTACAGCCAAGGCACAAAGGAACCCA
TGATCAGCAGCGCAATTCCACAGTAGTCAAGTTTAGAAAACAGTCTTCCC
ATCTCTACAGAATGACAGCTCAGTGTGTGAAAAGCGAATGAGAATCCTAG
GCACACAATCGCACCGATAAAGAAGGCGCCAAAAACGATCTTCTCCTGTG
TCTGGATCTCAACCGAGGGACGCGAGATGAAGTATAATGCCACGCCGATG
AAGGCGATGCAGCCAAGAAGATGTGTCCAGATGTTGCCCGTTTCCGTGTG
CACGCGGAAAATTGATTTAAAGCACGCACGGAAAGAGGGGAGCGGTGGGC
GATGGCCGCGGTGTAGGAAGTCGTTATCCTGCAGCCACTTGGGTAGATT
MXO02468.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 502..1332 | 849..19 | 4155 | 100 | Minus |
CG5315-PB | 1089 | CG5315-RB | 256..1086 | 849..19 | 4155 | 100 | Minus |
CG5315-PA | 1335 | CG5315-RA | 502..1332 | 849..19 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 730..1560 | 849..19 | 4155 | 100 | Minus |
AdipoR-RD | 1875 | CG5315-RD | 736..1566 | 849..19 | 4155 | 100 | Minus |
AdipoR-RA | 2299 | CG5315-RA | 736..1566 | 849..19 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22545118..22545434 | 533..849 | 1585 | 100 | Plus |
3R | 32079331 | 3R | 22544757..22545059 | 230..532 | 1515 | 100 | Plus |
3R | 32079331 | 3R | 22544426..22544558 | 19..151 | 665 | 100 | Plus |
3R | 32079331 | 3R | 22544614..22544695 | 150..231 | 410 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:04:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 514..478 | 113 | 78.4 | Minus |
MXO02468.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:07 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PB | 256..1089 | 18..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:04 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 502..1335 | 18..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:22 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 736..1566 | 19..849 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:47 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 736..1566 | 19..849 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:47 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544758..22545059 | 231..532 | 100 | <- | Plus |
3R | 22545118..22545434 | 533..849 | 100 | | Plus |
3R | 22544426..22544557 | 19..150 | 100 | <- | Plus |
3R | 22544615..22544694 | 151..230 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:22 Download gff for
MXO02468.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18370148..18370279 | 19..150 | 100 | <- | Plus |
arm_3R | 18370337..18370416 | 151..230 | 100 | <- | Plus |
arm_3R | 18370480..18370781 | 231..532 | 100 | <- | Plus |
arm_3R | 18370840..18371156 | 533..849 | 100 | | Plus |
MXO02468.5prime Sequence
908 bp (836 high quality bases) assembled on 2006-12-21
> MXO02468.5prime
CAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGGGCTCAGCG
GCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTAACCACCCA
GGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTACCGGCGAGG
CGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAGACGAGGAT
ATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGCTGGGGACC
GGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTACGACGATG
AGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGACCCCGGAG
GACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAGGCCGGAGT
TCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGCCGCCGAGC
AGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGAAAGTGTGC
CACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTCCTACACCG
CGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAAATCAATTT
TCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTCTTGGCTGC
ATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCCTCGGTTGA
GATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTATCGGTGCGA
TTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCTGTCATTCT
GTAGAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGAATTGCGCT
GCTGATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTTCTACTGTC
ATTACCAC
MXO02468.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 1..899 | 9..907 | 4495 | 100 | Plus |
CG5315-PA | 1335 | CG5315-RA | 1..899 | 9..907 | 4495 | 100 | Plus |
CG5315-PB | 1089 | CG5315-RB | 121..653 | 375..907 | 2665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 228..1127 | 8..907 | 4500 | 100 | Plus |
AdipoR-RD | 1875 | CG5315-RD | 234..1133 | 8..907 | 4500 | 100 | Plus |
AdipoR-RA | 2299 | CG5315-RA | 234..1133 | 8..907 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22546708..22547078 | 378..8 | 1840 | 99.7 | Minus |
3R | 32079331 | 3R | 22545118..22545472 | 826..472 | 1775 | 100 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 475..373 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22544979..22545059 | 907..827 | 405 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 21:59:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 845..881 | 113 | 78.4 | Plus |
MXO02468.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:08 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PC | 1..899 | 9..908 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:05 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 1..899 | 9..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:19 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 226..1133 | 1..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:47 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 226..1133 | 1..908 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:47 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544977..22545059 | 827..908 | 98 | <- | Minus |
3R | 22545118..22545470 | 474..826 | 100 | <- | Minus |
3R | 22545685..22545783 | 375..473 | 100 | <- | Minus |
3R | 22546712..22547082 | 1..374 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:19 Download gff for
MXO02468.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18372434..18372804 | 1..374 | 98 | | Minus |
arm_3R | 18370699..18370781 | 827..908 | 98 | <- | Minus |
arm_3R | 18370840..18371192 | 474..826 | 100 | <- | Minus |
arm_3R | 18371407..18371505 | 375..473 | 100 | <- | Minus |