MXO02470.3prime Sequence
910 bp (745 high quality bases) assembled on 2006-12-21
> MXO02470.3prime
ATGGTCTAGAAAGCTTGCCAGCTTCTCGATGAGAATGGAGGAGGCTCCAC
CGCCGCCATTGCAAATGGAGGCGCATCCCAGCTCGCCCTTCTTCAGGCTG
TGCGAAAGATGGGCCACCAGACGGGCTCCGGACATGCCGATTGGATGGCC
AATTGACACGGCACCTCCATGAACATTAACCTTGGCTGGATCCACATCCA
GTTTCTTGATATTGGCCAAAACGACCAGGGAGAAGGCCTCATTGACCTCC
CACATGGCCACGTCTTCCTTGCGAACGCCGGCACGCTTCAGTAATTTGGG
AATGGCCAGAGCTGGGGCAATGGGGAAGTCAATGGGATCGGTCTCCGCAT
CCTGGAAGGCCACAATCCTGGCCAGCGGCTTAATGCCCGCCTTCTGGGCT
GCCTCGGCACTCATCAAAACCACGGCGGCACCGCCATCATTCAAGGTGGA
TGCATTTCCGGCTGTCACAGTGCCATTTTCCCTTTGGAAAACGGTGGCCA
ACTGTCCAAACTTGTCAAAATTCACCCGCTTGTACTCCTCATCCTCTGAG
ATGACGATCTCCGGCTTCCTCTTCTGCTGAATCTTCACCGGGGCAATCTC
GTCCTGGAACACCTTGTTGGCCCACGCGGCAGCCGATCTCTTGTATGATT
CAATGGCAAAGTCATCCTGCTGCTGACGTGTGATCTCCAGTTTTTTGGCC
GTATTTTCGGCACAGTTGCCCATGTGGAACTTGTTGTACACATCCCAGAG
GCCATCGAAAACAATGCCGTCGGTGAGATTGACGCCGCCATAGGGCGTGG
CTCCCCTCTTCAGATAGTAGGGAACATTCGACATGGACTCCATACCGCCG
GGCACGAACACATCAGCATAGCCGAGCATCAGGGATTGGGCGCCCAGCAT
AACGGCCTTC
MXO02470.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 339..1230 | 910..19 | 4385 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 454..1345 | 910..19 | 4415 | 99.7 | Minus |
| CG10932-RA | 1517 | CG10932-RA | 454..1345 | 910..19 | 4415 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887441..7888332 | 19..910 | 4415 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:58 has no hits.
MXO02470.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:13 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 339..1233 | 15..910 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:06 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 339..1233 | 15..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:53 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 454..1350 | 14..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:27 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 454..1350 | 14..910 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:27 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887436..7888332 | 14..910 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:53 Download gff for
MXO02470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781469..7782365 | 14..910 | 99 | | Plus |
MXO02470.5prime Sequence
793 bp (671 high quality bases) assembled on 2006-12-21
> MXO02470.5prime
CAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCTGGAGCGCC
CATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTTTCGGCAGC
CCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACTGACGGCTA
CCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGGCCGGAATT
GCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTATCTGCTGG
TCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGGACTGCCCA
CCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGGGCATGAAG
GCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCTGATGTGGT
CGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTATCTGAAGA
GGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCATTGTTTTC
GATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAACTGTGCCGA
AAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGATGACTTTG
CCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACAAGGTGTTC
CAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAGCCGGAGAT
CGTCATCTCAGAGGATGAGGAGTACAAGCGGGGTGAATTTTGACAAGTTT
GGACAGTTGGCCACCGTTTTCCAAAGGGGAAAATGGCACTGTG
MXO02470.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 1..724 | 9..732 | 3620 | 100 | Plus |
| CG10932-PA | 1233 | CG10932-RA | 722..769 | 731..778 | 240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..898 | 9..793 | 3875 | 99.7 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..898 | 9..793 | 3875 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887888..7888670 | 793..9 | 3825 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:27 has no hits.
MXO02470.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:15 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..783 | 9..793 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:06 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..783 | 9..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:21 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..898 | 9..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:20 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..898 | 9..793 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:20 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887888..7888670 | 9..793 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:21 Download gff for
MXO02470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781921..7782703 | 9..793 | 99 | | Minus |
