Clone Sequence Records
MXO02471.3prime Sequence
735 bp (735 high quality bases) assembled on 2006-12-21
> MXO02471.3prime
ATGGTCTAGAAAGCTTGCTTTCTTGCGTTCGTAGCGGAATTTGTAGACGG
GCGCACTGTCCTTGGTTCCCGGCTTTATTTTCCTCGGCTTCAGTAGGCGT
GGCTGCTTGAGGGTGTTCTTCAGCTGAATCTTCTGCTGGACGATGCCGAG
TTCCCTTTCACGCTGCTCGCGTTTCTTCAGCTCGTTGATGCGCTGCTGTT
TGATGGGGTTTGGTTCAGTTGTTTTCGATTTCTTCTTCTTTTCCTCCTCT
TCCTCCTCGTCATCATGCTTTAAAAGCCATTCGCCCATGTCCAACTCCAT
GTATCCGTCTTCGTCAAATTTGATACGTTTGTTGGCTGCTCCCTTAATGG
CATCCACGTCCACCAGCGAGGCCTTCAAGCGTTCGATCTTCTTGCGCTCC
ATGGTGCGCTTCATCACCACGTACTTGAGGTCCTGCGTCTGCATGAGGGC
CAATTGCTCGGGCGTGTGCTCGTCCTTCGTGTCCTTCTCGTGGTGCTCAT
CGTTGGACAGCTTGGAGTTGATCATATGGTGGTAGAACTCATCGGGATTC
TTGTTCTGCGCCCGGCGGTACAATAGCTTCAAGGTCTTTTGCTTTTTCTG
TGCGTCGATGGCTCGCTTCTTGTAGTCCTTTTTCTTCTCCAGGAATCCCA
GATGCTGGCGCGACTCCGGCTGGTGGCGCTCCCTGTGCACCTTCTGGTTG
CTTTTCGACGCATTCTTCCACGATGACATGTCGAC
MXO02471.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1789-PA | 714 | CG1789-RA | 1..711 | 729..19 | 3555 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1789-RA | 860 | CG1789-RA | 87..797 | 729..19 | 3555 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8720606..8721109 | 729..226 | 2520 | 100 | Minus |
X | 23542271 | X | 8721233..8721440 | 226..19 | 1040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:49 has no hits.
MXO02471.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:17 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-PA | 1..714 | 18..729 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:07 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-PA | 1..714 | 18..729 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:21 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-RA | 80..797 | 19..735 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:32 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-RA | 80..797 | 19..735 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:32 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8720599..8721109 | 226..735 | 99 | -> | Minus |
X | 8721234..8721440 | 19..225 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:21 Download gff for
MXO02471.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8614632..8615142 | 226..735 | 99 | -> | Minus |
arm_X | 8615267..8615473 | 19..225 | 100 | | Minus |
MXO02471.5prime Sequence
735 bp (735 high quality bases) assembled on 2006-12-21
> MXO02471.5prime
CAGTCGACATGTCATCGTGGAAGAATGCGTCGAAAAGCAACCAGAAGGTG
CACAGGGAGCGCCACCAGCCGGAGTCGCGCCAGCATCTGGGATTCCTGGA
GAAGAAAAAGGACTACAAGAAGCGAGCCATCGACGCACAGAAAAAGCAAA
AGACCTTGAAGCTATTGTACCGCCGGGCGCAGAACAAGAATCCCGATGAG
TTCTACCACCATATGATCAACTCCAAGCTGTCCAACGATGAGCACCACGA
GAAGGACACGAAGGACGAGCACACGCCCGAGCAATTGGCCCTCATGCAGA
CGCAGGACCTCAAGTACGTGGTGATGAAGCGCACCATGGAGCGCAAGAAG
ATCGAACGCTTGAAGGCCTCGCTGGTGGACGTGGATGCCATTAAGGGAGC
AGCCAACAAACGTATCAAATTTGACGAAGACGGATACATGGAGTTGGACA
TGGGCGAATGGCTTTTAAAGCATGATGACGAGGAGGAAGAGGAGGAAAAG
AAGAAGAAATCGAAAACAACTGAACCAAACCCCATCAAACAGCAGCGCAT
CAACGAGCTGAAGAAACGCGAGCAGCGTGAAAGGGAACTCGGCATCGTCC
AGCAGAAGATTCAGCTGAAGAACACCCTCAAGCAGCCACGCCTACTGAAG
CCGAGGAAAATAAAGCCGGGAACCAAGGACAGTGCGCCCGTCTACAAATT
CCGCTACGAACGCAAGAAAGCAAGCTTTCTAGACC
MXO02471.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1789-PA | 714 | CG1789-RA | 1..711 | 9..719 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1789-RA | 860 | CG1789-RA | 87..797 | 9..719 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8720606..8721109 | 9..512 | 2520 | 100 | Plus |
X | 23542271 | X | 8721233..8721440 | 512..719 | 1040 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:53:15 has no hits.
MXO02471.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:19 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-PA | 1..714 | 9..720 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:07 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-PA | 1..714 | 9..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:19 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-RA | 87..797 | 9..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:53 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1789-RA | 87..797 | 9..719 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:53 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8720606..8721109 | 9..512 | 100 | -> | Plus |
X | 8721234..8721440 | 513..719 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:19 Download gff for
MXO02471.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8614639..8615142 | 9..512 | 100 | -> | Plus |
arm_X | 8615267..8615473 | 513..719 | 100 | | Plus |