MXO02473.3prime Sequence
723 bp (664 high quality bases) assembled on 2006-12-21
> MXO02473.3prime
ATGGTCTAGAAAGCTTGCGTTGTCCACTACGTTCATGTCCAGGAGAAGCT
TTTTGGTCTGCAGATCAATGAGCCGCCGCTTGGCCCTGGCCAACTCGGCC
ATCTCGTTGTAGTATATCGTTTCCGCCTTGAGCTTCTCGTCCAGCTGTGT
GGTGGACTCCGCCAGCGAGGCGCTGTCCTGCGGAATCATGTTCTGCATCT
CCGCCGGCTCCGGCTCATCGCACCTGTCCACCACCACGGAGTCCGAGTTG
TCCACAACGTACTCGTAGAAGGGTTCCTGCAGCGAAATCGAAGTGACCTC
TTCTTCAAGGTGATCGGCCACCTTTTCGATGATGCTGTCCACATCGTCAA
AGTTGACTTTCTCCAGGGGATCAGCCGCCTGCCTACGCTCCAGGCTGGCG
TAGGAGTCCTTCTTGGGTGTCATGAGGTGCTGGTGCGAGTGATTCAGCGT
CTTGGCCAGGCTGGTGTGACGACGCACAATGTGTCGCATCAGATTGGAGG
ACGAGTGCTTCGAGGAGAGCGTCTTGCCGCAGTGCATACATTTGGCCATG
AATTCGGAGATGCGGATAAAGTGCGCCCACAGTTTATTGTTCTTCCCAAT
GACCTTGTTGCGCATCTCCTCCTGGCTGTGCCGCTCCATCTGCTCTTGTT
CGAGCTTCGCGTTCATGATGCCGCGCACCGCCGACTTGGTCTCGCCCTCT
CCGAACTCCATGCTCAAGTCCTC
MXO02473.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15514-PA | 930 | CG15514-RA | 223..927 | 723..19 | 3475 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15514-RA | 1369 | CG15514-RA | 363..1067 | 723..19 | 3495 | 99.7 | Minus |
CG15514-RB | 1348 | CG15514-RB | 363..1046 | 723..19 | 3170 | 96.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29860705..29861132 | 296..723 | 2110 | 99.5 | Plus |
3R | 32079331 | 3R | 29860357..29860637 | 19..299 | 1405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:48:08 has no hits.
MXO02473.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:24 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-PA | 223..930 | 18..723 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:08 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-PA | 223..930 | 18..723 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:49 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-RA | 363..1071 | 13..723 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:42 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-RA | 363..1071 | 13..723 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:42 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29860353..29860635 | 13..297 | 98 | <- | Plus |
3R | 29860707..29861132 | 298..723 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:49 Download gff for
MXO02473.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25686075..25686357 | 13..297 | 98 | <- | Plus |
arm_3R | 25686429..25686854 | 298..723 | 99 | | Plus |
MXO02473.5prime Sequence
814 bp (732 high quality bases) assembled on 2006-12-21
> MXO02473.5prime
CAGTCGACATGGTTGGGAAAAACTTCAAGGCTCTAGCGCACTTCCACCGA
CTGACCGAGTACATAGTTCAGTGCAAACACTGCGAGAAGACATTGTCCTC
CAAACACACATCCTCCAACTTGACGCGCCACTTAATCCGGAACCACAAGC
TCTTGGCCCGATCAATTTTTGCCGGCGAGGAGGGTAAGATGCTGGCGGAG
CTGAAGGACGAGCTGGAAGCCTCCGCCTCCGAGGACCTGAGCATGGAGCT
CGGAGAGGGCGAGACCAAGTCGGCGGTGCGCGGCATCATGAACGCGAAGC
TCGAACAAGAGCAGATGGAGCGGCACAGCCAGGAGGAGATGCGCAACAAG
GTCATTGGGAAGAACAATAAACTGTGGGCGCACTTTATCCGCATCTCCGA
ATTCATGGCCAAATGTATGCACTGCGGCAAGACGCTCTCCTCGAAGCACT
CGTCCTCCAATCTGATGCGACACATTGTGCGTCGTCACACCAGCCTGGCC
AAGACGCTGAATCACTCGCACCAGCACCTCATGACACCCAAGAAGGACTC
CTACGCCAGCCTGGAGCGTAGGCAGGCGGCTGATCCCCTGGAGAAAGTCA
ACTTTGACGATGTGGACAGCATCATCGAAAAGGTGGCCGATCACCTTGAA
GAAGAGGTCACTTCGATTTCGCTGCAGGAACCCTTCTACGAGTACGTTGT
GGACAACTCGGACTCCGTGGTGGTGGACAGGTGCGATGAGCCGGAGCCGG
CGGAGATGCAGAACATGATTCCGCAGGACAGCGCCTCGCTGGCGGAGACC
ACCACACAGCTGGA
MXO02473.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15514-PA | 930 | CG15514-RA | 1..806 | 9..814 | 4005 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15514-RA | 1369 | CG15514-RA | 141..946 | 9..814 | 4015 | 99.9 | Plus |
CG15514-RB | 1348 | CG15514-RB | 141..925 | 9..814 | 3690 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29860705..29861354 | 658..9 | 3250 | 100 | Minus |
3R | 32079331 | 3R | 29860478..29860637 | 814..655 | 785 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:08:39 has no hits.
MXO02473.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:26 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-PA | 1..805 | 9..813 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:09 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-PA | 1..805 | 9..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:16 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-RA | 136..945 | 1..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:56 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15514-RA | 136..945 | 1..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:56 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29860479..29860635 | 657..813 | 99 | <- | Minus |
3R | 29860707..29861359 | 1..656 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:16 Download gff for
MXO02473.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25686201..25686357 | 657..813 | 99 | <- | Minus |
arm_3R | 25686429..25687081 | 1..656 | 99 | | Minus |