Clone Sequence Records
MXO02474.3prime Sequence
884 bp (851 high quality bases) assembled on 2006-12-21
> MXO02474.3prime
ATGGTCTAGAAAGCTTGCATAAAGAATCATTGTGAACTGGATACAAAGGA
AGGCCACAAAGCCTCTTAGTTGATAATTCGTTGCGGAGTTCTCCACAAAA
ACGCACTTGTTGTCCTCCAGTCGATGGGTCTTACTGCAGGAGCACTCGCC
CCAATTGCACACCATGGGATGGCCAATGGATGCTGTGGCATTCTCCTGGT
CCATGGGCTGCATCCGGCATTCGCTATCGTTTCGACAGAGTGCCCCGAAC
GGCACGATGGGTGCGCAAGTGATCCGCTCCAGATTGTTCACCGCATCGAG
ATCGTCGTTTTCGTCCTTGGCCACCTCGTTGGCTACCCTTTTGGGGTAGT
GGGTCGAACGGCAGACGCAGAGGTGATCCAGGCACCTGCCATCGGCACCC
AGGTTTAGCTTGCACGGCGAACTGTGCTCGCACGTGTCACCGTAAGCGGA
GCCCTTGATGCACTTGGTCATGTTGTGGTTGTGCACAAAGTTTTTGGAGC
AGCCGCACCGCTTCGTCTTTGTCAGGCAAATCGAGGCTCCACAGCTGCCG
CAATCCTTGTCCTCTAGACAGCTTGATTGCAAAACAGAAAGACAACGTCC
CTCGTGGAACTCGAATTGGTTAAGGCAGAGGCACTGGTTGCCAATGCAGG
AGCTAAACCGATCCGCCCGCTGGCACTGTTGCTGAAACTCACAGCTTCCG
CCCACCGGGACCACCGCCGGCAGGCAGCGTCTGCGGTCGTCACTGGACAC
ATGACCCTCGGAGCAGTGGCACTGCTGCCATCGCGTGTGGCATATGGCAT
TCGGCATGGGACATGGACAGGCACCACCAATGATGTTGGTCAGCTTGAGG
CGCTCCTCCAGCGGCGTACACGGCACCCGTTCGC
MXO02474.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-PA | 1035 | CG11674-RA | 167..1032 | 884..19 | 4330 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-RA | 1172 | CG11674-RA | 243..1108 | 884..19 | 4330 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14224711..14225270 | 19..578 | 2800 | 100 | Plus |
| X | 23542271 | X | 14225332..14225637 | 579..884 | 1530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:50 has no hits.
MXO02474.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:28 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-PA | 167..1035 | 18..884 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:09 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-PA | 167..1035 | 18..884 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:08 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 243..1108 | 19..884 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:09 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 243..1108 | 19..884 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:09 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14224711..14225270 | 19..578 | 100 | <- | Plus |
| X | 14225332..14225637 | 579..884 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:08 Download gff for
MXO02474.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14118744..14119303 | 19..578 | 100 | <- | Plus |
| arm_X | 14119365..14119670 | 579..884 | 100 | | Plus |
MXO02474.5prime Sequence
902 bp (811 high quality bases) assembled on 2006-12-21
> MXO02474.5prime
CAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGCTGGCCGGA
TTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCCTGCAGCTC
GGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGACATGGCCT
GCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTACGCCGCTG
GAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGTCCATGTCC
CATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCACTGCTCCG
AGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGGCGGTGGTC
CCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGGGCGGATCG
GTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCAATTCGAGT
TCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTCTAGAGGAC
AAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAGACGAAGCG
GTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGACCAAGTGCA
TCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGCCGTGCAAG
CTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGCGTCTGCCG
TTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAAGGACGAAA
ACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTTGCGCACCC
ATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGCCGGATGCA
GCCCATGGACCAGGAGAATGCCACAGCATCCTTTGGCCATCCCCTGGTGT
GC
MXO02474.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-PA | 1035 | CG11674-RA | 1..894 | 9..902 | 4420 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11674-RA | 1172 | CG11674-RA | 75..970 | 7..902 | 4450 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14225332..14225805 | 480..7 | 2370 | 100 | Minus |
| X | 23542271 | X | 14224849..14225270 | 902..481 | 2080 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:11:43 has no hits.
MXO02474.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:29 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-PA | 1..894 | 9..902 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:10 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-PA | 1..894 | 9..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:38 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 70..970 | 1..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:49 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11674-RA | 70..970 | 1..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:49 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14224849..14225270 | 481..902 | 99 | <- | Minus |
| X | 14225332..14225809 | 1..480 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:38 Download gff for
MXO02474.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14118882..14119303 | 481..902 | 99 | <- | Minus |
| arm_X | 14119365..14119842 | 1..480 | 99 | | Minus |
