MXO02476.3prime Sequence
676 bp (638 high quality bases) assembled on 2006-12-21
> MXO02476.3prime
ATGGTCTAGAAAGCTTGCTTCACTGTGGCTCTCTAGGTAAACTGTTGCAT
TGTCCACGCCCATAAACTGGTGTATACTCAGCGAGGACAGCATTTTCATC
TGGCCCTGGTACAGCACATCGGCGATGATCTTTTCCGCGTAGATAGCCTG
TGTTCCGTCCATGGAGCGAAGCTTGTGTGCGATAATTTTCCCGAAGTTGG
AGAAGTGGTCGTCCAGCTGGCTGTCCGCACTCTTTAGGGCCAGCGAAAAG
AGGCGCTCAAAGTCAATGGTGGAAATGTCCGCTCGGAATTTACCTGGAGG
CGGCTCGTTGTCCTCCGAAATCTGCGAAGAGACCGAGGAGGACCTTTTCC
GTGTTATGTGATTGGCTTTCTGGCTCGGGCTCTGATTACTGATCAGTTTC
GTTTGGTTCTGGGTGACGATGCGCTTGCACTGCGGCGATTCGGAGTCGCC
AGGCGGAGACTTTATGGAGTCGGGCACGGATTTTCTGCGGGCGGACAGCA
GCCTGTTGTTAGCAGGCACCACGATTTCGACCTCCTTGATAGTAGCGCCA
CTGGCATGGCTGTTGGCGTTGTTGACTGTTTTAATACTGATAACGGGGTC
AGCGGCAGCGGCGGCGGCGGCCTCCTCGAAGATGTTGGCACAGAATTCGT
TGGCGCTGTTGTTGGGTGACATCTTG
MXO02476.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-PA | 1107 | CG3163-RA | 447..1101 | 676..22 | 3275 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-RA | 1239 | CG3163-RA | 508..1162 | 676..22 | 3275 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24029824..24030478 | 676..22 | 3275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:56 has no hits.
MXO02476.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:34 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-PA | 447..1107 | 16..676 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:10 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-PA | 447..1107 | 16..676 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:12 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 508..1164 | 19..676 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:13 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 508..1164 | 19..676 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:13 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24029824..24030480 | 19..676 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:12 Download gff for
MXO02476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19917347..19918003 | 19..676 | 99 | | Minus |
MXO02476.5prime Sequence
886 bp (804 high quality bases) assembled on 2006-12-21
> MXO02476.5prime
CAGTCGACATGGACTTTATCGACGACTTCATCGAAGAATACAAAAGCAAT
CCGTGCTTGTGGAAGGCGGACTCGGCGGACTTCAGGAACCGCAGCCGCCG
GCAGGAGGCCTACGCGAAGCTCATCGAGGTGGCCACCAAGCACGGGGAGA
TGTACAATGTGGAGCGAACAAAGCAAAAGATAAACAATCTGCGCTGTGCA
TTTCGTCATCAGCTGAGGAAATACAACGAGGTCAAGAAAAAGGGCGAGAA
GTACGAGCCCTACTGCCCCAAGCGCCGCTACTTCGAGTCCCTGATGTTCC
TTAAGGACGAGGAGATCCCCGCCGACAAGAAGTTCAAGCGCGAGCAGTCG
GTCTGCCTGGACAACTCCATGCAGCTAGGGGCGCCAGAGAACGGCGACGA
GTATTCCGACGCCGAGAGCCTGCACAAGCCCCCAAAGCCGACGGCAGACT
CGATCAAGATGTCACCCAACAACAGCGCCAACGAATTCTGTGCCAACATC
TTCGAGGAGGCCGCCGCCGCCGCTGCCGCTGACCCCGTTATCAGTATTAA
AACAGTCAACAACGCCAACAGCCATGCCAGTGGCGCTACTATCAAGGAGG
TCGAAATCGTGGTGCCTGCTAACAACAGGCTGCTGTCCGCCCGCAGAAAA
TCCGTGCCCGACTCCATAAAGTCTCCGCCTGGCGACTCCGAATCGCCGCA
GTGCAAGCGCATCGTCACCCAGAACCAAACGAAACTGATCAGTAATCAGA
GCCCGAGCCAGAAAGCCAATCACATAACACGGAAAAGGTCCTCCTCGGTC
TCTTCGCAGATTTCGGAGGACAACGAGCCGCCTCCAGGTAAATTCCGAGC
GGACATTTCCACCATTGACTTTGAGCGCCTCTTTTC
MXO02476.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-PA | 1107 | CG3163-RA | 1..878 | 9..886 | 4390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3163-RA | 1239 | CG3163-RA | 62..939 | 9..886 | 4390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24029378..24030255 | 9..886 | 4390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:24 has no hits.
MXO02476.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:36 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-PA | 1..878 | 9..886 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:11 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-PA | 1..878 | 9..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:13 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..939 | 9..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:30 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3163-RA | 62..939 | 9..886 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:30 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24029378..24030255 | 9..886 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:13 Download gff for
MXO02476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19916901..19917778 | 9..886 | 100 | | Plus |
