MXO02477.3prime Sequence
912 bp (753 high quality bases) assembled on 2006-12-21
> MXO02477.3prime
ATGGTCTAGAAAGCTTGCCATGTATTTAAATCTCAACCTTAACGTACGCT
CCTGGATGAGTAGCTCCACCTCGTTGCGGAGCACATTGATGTGTTCCATA
AAGTCCTCGCGAACTGCGTTGCGCCAGTCGTGCAGGCCATCGCTGCCCAC
ATGGTCGCAGTCCACGTAGCGGTGCACGAATCCGGTTGATAACGATAGTT
CCACATCGGATGTACTGGCCAAGAGCTGCGCCGGCGGCAGCTCCAGGCGA
TTCAGCAATGTTTTGAACTCAGATCTTCGCTCCGGGTCGTACTGAACGTT
GTCGGGCAACAGTTTCTTCCGGTCATCGAAGCACACGGACATGGTTGCCA
GTTCGAAGCGCGTGATCTCGGAGGAGAAGTGTCGCAGCTGCTGCTGGAGC
GATCCCTTCACCTGGTCCCCAGAGAACTTTGAGTTGGGGAAGAACAGCTC
GTTGGGGCGGAGTAGAAGGGTGAAGCCGGCGTGGTTCACATTCCGCAGCA
AGCAGTCCGTGAGTAATAGTTGATGGATTCGCGAACGTGTGCCATTGGAC
TGCTGGAAGGGAAAGTTAAAAGGCAGGCCATACAGATGAATGTTGGTGCG
CTCCAACAGGTGATGCACTTCCTCTGGCAGTTCGTCGTGGTTGTAGACCA
GGAAATTCTCTATTCCCAATGCCTGGTGGAACAGGAAGAACTGCAGCAAA
GCATTTTCATTACGTGCGAACTTGGAGGTCATGTTGAAGCCAACGAGATC
AACGCAAACGGTGGCTGGTAGTCGGTGCGCTACAGCTACCACCTTGTCGT
CGTCCTTCTTGCTCGCTGGTCTCAGGTTTCGCAGACGCAGCCTCACTGGA
CTCCTGGTGGTTGGTATGTCCGTGAAGGAGACACTGCCGGGCTGACCGAA
ATCTCGGCTCAC
MXO02477.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11127-PA | 1350 | CG11127-RA | 454..1347 | 912..19 | 4445 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11127-RA | 1484 | CG11127-RA | 540..1433 | 912..19 | 4455 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7464043..7464936 | 912..19 | 4455 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:59 has no hits.
MXO02477.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:37 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-PA | 454..1350 | 18..912 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:11 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-PA | 454..1350 | 18..912 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:14 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-RA | 540..1439 | 10..912 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:14 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-RA | 540..1439 | 10..912 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:14 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7464043..7464942 | 10..912 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:14 Download gff for
MXO02477.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3351548..3352447 | 10..912 | 99 | | Minus |
MXO02477.5prime Sequence
879 bp (792 high quality bases) assembled on 2006-12-21
> MXO02477.5prime
CAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCATCTCCTGC
CTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAATCGCCTAAA
GTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGCCGCTGTCC
TCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGGTGCTGTGG
CGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCATGCCTACTC
CGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGCCCACGTTC
TGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCAGCTTGGAC
CTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAGAGGGACTC
CATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAGCTATCACT
TCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTGTCTCCTTC
ACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTGCGAAACCT
GAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGTAGCGCACC
GACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACATGACCTCC
AAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTGTTCCACCA
GGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGAACTGCCAG
AGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGTATGGCCTG
CCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCGCGAATCCA
TCAACTATTACTCACGGACTGCTTGCTGC
MXO02477.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11127-PA | 1350 | CG11127-RA | 1..871 | 9..879 | 4355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11127-RA | 1484 | CG11127-RA | 87..957 | 9..879 | 4355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7463590..7464460 | 9..879 | 4355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:30:39 has no hits.
MXO02477.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:39 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-PA | 1..871 | 9..879 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:12 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-PA | 1..871 | 9..879 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:19 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-RA | 78..957 | 1..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:51 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11127-RA | 78..957 | 1..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:51 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7463581..7464460 | 1..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:19 Download gff for
MXO02477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3351086..3351965 | 1..879 | 99 | | Plus |