MXO02483.3prime Sequence
828 bp (828 high quality bases) assembled on 2006-12-21
> MXO02483.3prime
ATGGTCTAGAAAGCTTGCGTATCCCTTTATGGTTTCGGCGAATGTCCAGT
TTTCGTTAACTTGGAAGGGCCCCTCCACGCCGCATCCGTTGACGCTGCAC
ACGCCCACAGTGTATTGGGAAATATTACGAGTATCGCGGTAGTAAAGCAC
CTCCATGCATGTGCGGATCAGTTCGGAAGCTTCTACGGCGGTAAAGTCCC
TGTCCTTGGGCTTCTTCTCACGGACCAGCGGAACGGCCAAATGGCGGGCA
AAACCAGTGGCCACCACGTAGTCCTCGTAGGATCGTCCACGGAGATCCAC
GTTGGCCAGGTACGGAGTCCCCTCGTTGTCCACGCCGCCGACAACCACGT
CAATGTAGAGGGGGTTCATCCGCGAACGACGGTTGTAGAGCACACGGGTC
ATCCAACTGGCCAAGGACTTGGGCTTCATCTCGATGTTGTCGTCGCAGCA
CTGGTCCTCGATCATCTTCTGGTCGATGTTGCGCTTGATGGACTGGATGT
CAGCGAAGTCGCCGCTCCCGCCGAGCAGGATGTTCTTGTTGACCTTAAAG
ACGCGCTCAATGTTTTGGTAGCGGGCCATGGATCCGTAAGACACCAGGGT
GTCGGCGGCCAGCATCACTCCTGAATCATAGCGAATGCCAAGCACGGAAG
TGCCCGTGGTGCTGGAAGCAGTGCTGTGCTTGGTTCCATAGGGTCCCATT
GTGGTCAGCTCCCGCGGTAGCTGCTGGACCGGCGTCTGTCCGCCCGTGAA
GTTGTAGAACTCGCCGGGAGCGGGTCCGTTCTGCCACATGGGCTGCGCTA
GGCTGTTGTAGTTGTTCAACATGTCGAC
MXO02483.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12000-PA | 807 | CG12000-RA | 1..804 | 822..19 | 4020 | 100 | Minus |
CG12000-PB | 807 | CG12000-RB | 1..804 | 822..19 | 4020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta7-RB | 1026 | CG12000-RB | 100..904 | 823..19 | 4025 | 100 | Minus |
Prosbeta7-RA | 1215 | CG12000-RA | 289..1093 | 823..19 | 4025 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5357355..5357860 | 169..674 | 2515 | 99.8 | Plus |
3R | 32079331 | 3R | 5357924..5358076 | 671..823 | 765 | 100 | Plus |
3R | 32079331 | 3R | 5357134..5357284 | 19..169 | 755 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 4427..4500 | 488..419 | 109 | 63.5 | Minus |
MXO02483.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:56 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12000-PB | 1..807 | 18..822 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:17 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12000-PB | 1..807 | 18..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:55 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta7-RA | 285..1099 | 13..828 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:48 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta7-RA | 285..1099 | 13..828 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:48 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5357128..5357283 | 13..168 | 98 | <- | Plus |
3R | 5357355..5357856 | 169..670 | 100 | <- | Plus |
3R | 5357924..5358079 | 671..828 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:55 Download gff for
MXO02483.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1182850..1183005 | 13..168 | 98 | <- | Plus |
arm_3R | 1183077..1183578 | 169..670 | 100 | <- | Plus |
arm_3R | 1183646..1183801 | 671..828 | 98 | | Plus |
MXO02483.5prime Sequence
752 bp (751 high quality bases) assembled on 2006-12-21
> MXO02483.5prime
CAGTCGACATGTTGAACAACTACAACAGCCTAGCGCAGCCCATGTGGCAG
AACGGACCCGCTCCCGGCGAGTTCTACAACTTCACGGGCGGACAGACGCC
GGTCCAGCAGCTACCGCGGGAGCTGACCACAATGGGACCCTATGGAACCA
AGCACAGCACTGCTTCCAGCACCACGGGCACTTCCGTGCTTGGCATTCGC
TATGATTCAGGAGTGATGCTGGCCGCCGACACCCTGGTGTCTTACGGATC
CATGGCCCGCTACCAAAACATTGAGCGCGTCTTTAAGGTCAACAAGAACA
TCCTGCTCGGCGGGAGCGGCGACTTCGCTGACATCCAGTCCATCAAGCGC
AACATCGACCAGAAGATGATCGAGGACCAGTGCTGCGACGACAACATCGA
GATGAAGCCCAAGTCCTTGGCCAGTTGGATGACCCGTGTGCTCTACAACC
GTCGTTCGCGGATGAACCCCCTCTACATTGACGTGGTTGTCGGCGGCGTG
GACAACGAGGGGACTCCGTACCTGGCCAACGTGGATCTCCGTGGACGATC
CTACGAGGACTACGTGGTGGCCACTGGTTTTGCCCGCCATTTGGCCGTTC
CGCTGGTCCGTGAGAAGAAGCCCAAGGACAGGGACTTTACCGCCGTAGAA
GCTTCCGAACTGATCCGCACATGCATGGAGGTGCTTTACTACCGCGATAC
TCGTAATATTTCCCAATACACTGTGGGCGTGTGCAGCGTCAACGGATGCG
GC
MXO02483.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12000-PA | 807 | CG12000-RA | 1..744 | 9..752 | 3720 | 100 | Plus |
CG12000-PB | 807 | CG12000-RB | 1..744 | 9..752 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta7-RB | 1026 | CG12000-RB | 100..844 | 8..752 | 3725 | 100 | Plus |
Prosbeta7-RA | 1215 | CG12000-RA | 289..1033 | 8..752 | 3725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5357355..5357860 | 662..157 | 2515 | 99.8 | Minus |
3R | 32079331 | 3R | 5357924..5358076 | 160..8 | 765 | 100 | Minus |
3R | 32079331 | 3R | 5357194..5357284 | 752..662 | 455 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:04:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 4427..4500 | 343..412 | 109 | 63.5 | Plus |
MXO02483.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:29:58 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12000-PB | 1..744 | 9..752 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:17 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12000-PB | 1..744 | 9..752 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:20 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta7-RA | 283..1033 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:45 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta7-RA | 283..1033 | 1..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:45 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5357194..5357283 | 663..752 | 100 | <- | Minus |
3R | 5357355..5357856 | 161..662 | 100 | <- | Minus |
3R | 5357924..5358081 | 1..160 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:20 Download gff for
MXO02483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1182916..1183005 | 663..752 | 100 | <- | Minus |
arm_3R | 1183077..1183578 | 161..662 | 100 | <- | Minus |
arm_3R | 1183646..1183803 | 1..160 | 97 | | Minus |