MXO02490.5prime Sequence
675 bp (675 high quality bases) assembled on 2006-12-21
> MXO02490.5prime
CAGTCGACATGTTCGTGGCCCGTAAAATTTCGCAAACTGCAAGCCTGGCG
GTGCGTGGCAAGCACACCCTACCGAAGCTGCCCTACGACTATGCCGCCCT
GGAGCCTATCATCTGCCGGGAGATCATGGAGCTGCATCACCAGAAGCACC
ACCAGACCTACGTCAACAATCTAAATGCCGCCGAGGAGCAGCTGGAGGAG
GCCAAGTCGAAGAGCGACACCACCAAGCTGATTCAGCTGGCTCCTGCCCT
GCGTTTCAATGGCGGTGGCCACATCAACCACACCATCTTCTGGCAGAACC
TCTCGCCCAACAAGACCCAGCCCAGCGATGATCTGAAGAAGGCCATCGAG
TCGCAGTGGAAGAGCCTCGAGGAGTTCAAAAAGGAGCTGACCACGCTGAC
CGTGGCGGTCCAGGGCTCCGGCTGGGGCTGGCTGGGCTTCAACAAGAAGT
CGGGCAAACTGCAACTGGCCGCCCTGCCCAACCAGGATCCCCTGGAGGCC
TCCACCGGCCTGATCCCGCTCTTCGGCATCGATGTCTGGGAGCACGCCTA
CTATCTGCAGTACAAGAACGTGCGTCCCTCCTACGTGGAGGCCATCTGGG
ACATCGCCAACTGGGATGACATCTCGTGCCGCTTCCAGGAGGCCAAGAAG
CTCGGTTGCGCAAGCTTTCTAGACC
MXO02490.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8905-PA | 654 | Sod2-RA | 1..651 | 9..659 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sod2-RB | 1015 | CG8905-RB | 127..777 | 9..659 | 3255 | 100 | Plus |
Sod2-RA | 884 | CG8905-RA | 127..777 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16773023..16773640 | 659..42 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:57:35 has no hits.
MXO02490.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:22 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:24 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8905-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:47 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-RA | 120..782 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:39 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-RA | 120..782 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:39 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16773018..16773638 | 44..665 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:47 Download gff for
MXO02490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12660523..12661143 | 44..665 | 99 | <- | Minus |
MXO02490.3prime Sequence
675 bp (675 high quality bases) assembled on 2006-12-21
> MXO02490.3prime
ATGGTCTAGAAAGCTTGCGCAACCGAGCTTCTTGGCCTCCTGGAAGCGGC
ACGAGATGTCATCCCAGTTGGCGATGTCCCAGATGGCCTCCACGTAGGAG
GGACGCACGTTCTTGTACTGCAGATAGTAGGCGTGCTCCCAGACATCGAT
GCCGAAGAGCGGGATCAGGCCGGTGGAGGCCTCCAGGGGATCCTGGTTGG
GCAGGGCGGCCAGTTGCAGTTTGCCCGACTTCTTGTTGAAGCCCAGCCAG
CCCCAGCCGGAGCCCTGGACCGCCACGGTCAGCGTGGTCAGCTCCTTTTT
GAACTCCTCGAGGCTCTTCCACTGCGACTCGATGGCCTTCTTCAGATCAT
CGCTGGGCTGGGTCTTGTTGGGCGAGAGGTTCTGCCAGAAGATGGTGTGG
TTGATGTGGCCACCGCCATTGAAACGCAGGGCAGGAGCCAGCTGAATCAG
CTTGGTGGTGTCGCTCTTCGACTTGGCCTCCTCCAGCTGCTCCTCGGCGG
CATTTAGATTGTTGACGTAGGTCTGGTGGTGCTTCTGGTGATGCAGCTCC
ATGATCTCCCGGCAGATGATAGGCTCCAGGGCGGCATAGTCGTAGGGCAG
CTTCGGTAGGGTGTGCTTGCCACGCACCGCCAGGCTTGCAGTTTGCGAAA
TTTTACGGGCCACGAACATGTCGAC
MXO02490.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8905-PA | 654 | Sod2-RA | 1..651 | 669..19 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sod2-RB | 1015 | CG8905-RB | 127..777 | 669..19 | 3255 | 100 | Minus |
Sod2-RA | 884 | CG8905-RA | 127..777 | 669..19 | 3255 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16773023..16773640 | 19..636 | 3090 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:52:43 has no hits.
MXO02490.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:20 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:24 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8905-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:50 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-RA | 121..782 | 13..675 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:30 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sod2-RA | 121..782 | 13..675 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:30 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16773018..16773638 | 13..634 | 99 | <- | Plus |
2R | 16773755..16773795 | 635..675 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:50 Download gff for
MXO02490.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12660523..12661143 | 13..634 | 99 | <- | Plus |
arm_2R | 12661260..12661300 | 635..675 | 92 | | Plus |