MXO02492.3prime Sequence
843 bp (740 high quality bases) assembled on 2006-12-21
> MXO02492.3prime
ATGGTCTAGAAAGCTTGCTAGGTTGCTTTTTCTCTTCCTCCGCTTGACAT
TCTCTGAATCCTCCACGGCCAACTTGAATTCCTTGACGACCTCGGGCAGC
GTCTCATCCGTCCCGTCCACCGTCCAGTTCTCCAGATGCGGTGGGCGGTG
GTGCAGAATGAAGGGATTAATGACGGCCGCCACACCCTGCGCATTGTTGA
GGTGAACGTGGTGGGTGCCCTGCACTTCGTGGAGCTCGAAGTGCGGGTTG
TTCTCCCTGAGGATGCCAATCACCTCGTCGCTCTGCTCGTCTATGTAGTT
CGACTCGGAGCCCTTGATCACGCAGTAGGGCACATTCTTGATGGTCCTGG
CCAGTTCAGCGGCGAAGGGAGGACTCGTATGGAACTCCGTGTAGTACTTG
CAGCGACCGTCGCGCGAGAAGAAGAACTTGGCCGGGAACTTGGTGGAACG
GCTGATGTTGCGCTCCAGGATGTGGCGGCAGTTCTCCAGCTCCACCGAGT
AGTCGGTGCCTTTGTACAGGACCTGCTCCATCTCTGTGTAGGTATAGGCC
GGCGGCTCCTGGCGCTTGGAATTCGCAAATCGCTCGTCCTCCACAATGTA
GCCCTCGATGTTCTTGCGCAGATAGTCGATCTGCGAGGGGGGCTTCCTAT
AGCGGGTCTTCACTATATCTATGCTGACCAACATGTCGGTGCGATGTGGG
TACAGCGAAGCGAATACGAAGCACAGCATGGCGCTCATTGAGTGGGCCAT
CAGGGACACCTTCTGCCAGCGGTACTCCTCCATTACGCGCANGATCACGC
ACAGGTAGTCCACGAAGTGGTAGGCAATCCCCTCGGGCAGCTT
MXO02492.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5707-PA | 1074 | CG5707-RA | 247..1071 | 843..19 | 4106 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5707-RC | 1714 | CG5707-RC | 659..1483 | 843..19 | 4114 | 99.9 | Minus |
CG5707-RB | 1477 | CG5707-RB | 422..1246 | 843..19 | 4114 | 99.9 | Minus |
CG5707-RA | 1533 | CG5707-RA | 478..1302 | 843..19 | 4114 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2189391..2190215 | 19..843 | 4114 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:29:00 has no hits.
MXO02492.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:27 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-PA | 247..1074 | 18..843 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:25 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-PA | 247..1074 | 18..843 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:19 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-RA | 478..1310 | 8..843 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:06 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-RA | 478..1310 | 8..843 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:06 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2189383..2190215 | 8..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:19 Download gff for
MXO02492.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2189383..2190215 | 8..843 | 99 | | Plus |
MXO02492.5prime Sequence
795 bp (719 high quality bases) assembled on 2006-12-21
> MXO02492.5prime
CAGTCGACATGACATCGAATTCCGAAGGTCGAGGCAACCCCATCGAGACG
CATGAACAGGAGCCCATGGACGTGCGCATCGACATGCCGTGGGGTTATGT
GGTGGGCAAGTGGTACGGCAATCGGCAGGTACGACCCATCCTGGCGCTGC
ATGGCTGGCTGGACAACCTGGGCACGTGGGACAAATTGCTGCCCCTGCTA
CCGAAGCACCTGGGAGTGCTGTGCATCGACCTGCCCGGCCACGGATACTC
CTCGAAGCTGCCCGAGGGGATTGCCTACCACTTCGTGGACTACCTGTGCG
TGATCCTGCGCGTAATGGAGGAGTACCGCTGGCAGAAGGTGTCCCTGATG
GCCCACTCAATGAGCGCCATGCTGTGCTTCGTATTCGCTTCGCTGTACCC
ACATCGCACCGACATGTTGGTCAGCATAGATATAGTGAAGACCCGCTATA
GGAAGCCCCCCTCGCAGATCGACTATCTGCGCAAGAACATCGAGGGCTAC
ATTGTGGAGGACGAGCGATTTGCGAATTCCAAGCGCCAGGAGCCGCCGGC
CTATACCTACACAGAGATGGAGCAGGTCCTGTACAAAGGCACCGACTACT
CGGTGGAGCTGGAGAACTGCCGCCACATCCTGGAGCGCAACATCAGCCGT
TCCACCAAGTTCCCGGCCAAGTTCTTCTTCTCGCGCGACGGTCGCTGCAA
GTACTACACGGAGTTCCATACGAGTCCTCCCTTCACCGCTGAACTGGCCA
GGACCATCAAGAATGTGCCCTACTGCGTGATCAAGGGCTCCGAGT
MXO02492.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5707-PA | 1074 | CG5707-RA | 1..787 | 9..795 | 3910 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5707-RA | 1533 | CG5707-RA | 232..1018 | 9..795 | 3920 | 99.9 | Plus |
CG5707-RC | 1714 | CG5707-RC | 464..1199 | 60..795 | 3665 | 99.9 | Plus |
CG5707-RB | 1477 | CG5707-RB | 227..962 | 60..795 | 3665 | 99.9 | Plus |
CG5707-RC | 1714 | CG5707-RC | 232..282 | 9..59 | 255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2189675..2190413 | 795..57 | 3680 | 99.9 | Minus |
3L | 28110227 | 3L | 2191939..2191990 | 60..9 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:01:41 has no hits.
MXO02492.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:28 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-PA | 1..787 | 9..795 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:26 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-PA | 1..787 | 9..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:19 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-RA | 232..1018 | 9..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:39 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5707-RA | 232..1018 | 9..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:39 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2189675..2190410 | 60..795 | 99 | <- | Minus |
3L | 2191940..2191990 | 9..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:19 Download gff for
MXO02492.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2189675..2190410 | 60..795 | 99 | <- | Minus |
arm_3L | 2191940..2191990 | 9..59 | 100 | | Minus |