MXO02493.3prime Sequence
480 bp (480 high quality bases) assembled on 2006-12-21
> MXO02493.3prime
ATGGTCTAGAAAGCTTGCCTCATTCCACTCTTCCTCGTTGCGTCCAAACT
TGTAGACCAAACTGGCGAACAGGATGAAGACGTTTTGCATCAGCAGAGCC
ACGCCAAACCAGCCATCCTTCTTTTCATTGTTGATGAAGTCGTCGATCAT
CACCCAGATGGCGGCAATGATGGAGGCAAAACCCATTAGGAAGCCCACAA
GCAGCCAGATCTTCGCTATCCTGGCGCCGGACTCCGATGAGTTCTCATCA
GAAATATGTTCTCCCTTCACTGCGTTCACCATGCAGAAGCTGATGGTCCC
GAAGATGCCGATGAAGACGTGTCCTGTGGTAATCTGGTGCTTGCCGTCGA
TGGACATGGCATCGATTAGAACCCACCATCCTGCGAAAAACAGAAGTCCG
GCTATTATGGAGGTGTTCCTGTTCCTGGACGCATCCCCCGTGAAATGCAA
CGCAATATTGTCCAACACGCCCATGTCGAC
MXO02493.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15012-PB | 459 | CG15012-RB | 1..456 | 474..19 | 2280 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15012-RC | 858 | CG15012-RC | 94..557 | 474..11 | 2290 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4291875..4292010 | 256..391 | 680 | 100 | Plus |
| 3L | 28110227 | 3L | 4291687..4291816 | 126..255 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 4291509..4291624 | 11..126 | 550 | 98.3 | Plus |
| 3L | 28110227 | 3L | 4292070..4292153 | 391..474 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:51:51 has no hits.
MXO02493.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:30 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-PB | 1..459 | 15..474 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:26 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-PB | 1..459 | 15..474 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:10 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-RC | 87..557 | 11..480 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:56 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15012-RC | 87..557 | 11..480 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:56 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4291509..4291623 | 11..125 | 98 | <- | Plus |
| 3L | 4291687..4291816 | 126..255 | 100 | <- | Plus |
| 3L | 4291875..4292009 | 256..390 | 100 | <- | Plus |
| 3L | 4292070..4292155 | 391..480 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:10 Download gff for
MXO02493.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4291687..4291816 | 126..255 | 100 | <- | Plus |
| arm_3L | 4291875..4292009 | 256..390 | 100 | <- | Plus |
| arm_3L | 4292070..4292155 | 391..480 | 95 | | Plus |
| arm_3L | 4291509..4291623 | 11..125 | 98 | <- | Plus |
