MXO02494.3prime Sequence
882 bp (777 high quality bases) assembled on 2006-12-21
> MXO02494.3prime
ATGGTCTAGAAAGCTTGCAACGCTCGACCTCGACGCGCCCACGATGTAGC
CCTTGGCGGTGAGAACGCCCCGGCAGCGGACATGCACCTGGTAACGCAGT
GTCCAGTCGATTGTGTAGCCAGGGACCAGTCCGTCGAACTGCTCCACGGG
CAGCAGGAGCTCGGGATCGCTGTGCGTGTTCAGTTGGATGTCGTGAGCGG
TGCAGAACTCCTGCAGTTCTGGTGGCACCACGCAGCACGTAGACAGGTTG
ACCTGGGCAATTGTGGGCACAACCTGTGCGCTGTTGTGTAGCTCCTCCAG
CGCCGCCGCATCCAGATCGGCAATTCCCAGCTGTGTAATCTGCTGCTTGA
GGGCATATTGCTCCAGTGTTTTGTACAGTTCCTTCAGCTCTGCCACTCCT
TCCTTTCCATTGCGCTGGCTCCAGTTTGTAGCCCTGCTGACGTTGGAATC
CTCGGAACAGGGCGGTTTGGTTGTGGCCACCGGCGTTGCGGTGGCAACCG
CATTCGGGTGGTAGGCCAACACCACATTGTCCACGTGCGTCACACTAAGT
ATGTGGAGCAGCTCCTCCACCGCCTGATTCACAGACTCTGTGGAGTGGCG
ATTGAGGAATATCTTGGCACCGATACTTATCTCATTCCGTCCATTCTCCG
TCAAGCGGGTGGTCAACTCCTGGGTGGCCCTTTGCACCCGCCCATGCAGC
TCGTCGATCTCCTTTTCAACCACCACGCGCTCCGCAGTCGAGTCGGTGTG
GAGCGTTATCTTCAGGCCGTCGTACAGCTCCTCGTTCGATTTGCGCTGTC
CCAGTTCCGTGGCGATGATGTTGCCCGTGCTAATCACCACGTTCTGGTAC
TTCTTCGTTATGGTCGGTATCATGTCGACTGA
MXO02494.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4919-PA | 858 | Gclm-RA | 1..855 | 873..19 | 4275 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gclm-RB | 1505 | CG4919-RB | 160..1015 | 874..19 | 4280 | 100 | Minus |
Gclm-RA | 1211 | CG4919-RA | 160..1015 | 874..19 | 4280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22685496..22686351 | 19..874 | 4280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:02 has no hits.
MXO02494.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:32 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-PA | 1..858 | 18..873 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:27 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4919-PA | 1..858 | 18..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:16 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-RA | 152..1021 | 10..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:15 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-RA | 152..1021 | 10..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:15 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22685489..22686354 | 10..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:16 Download gff for
MXO02494.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18511211..18512076 | 10..881 | 99 | | Plus |
MXO02494.5prime Sequence
784 bp (733 high quality bases) assembled on 2006-12-21
> MXO02494.5prime
CAGTCGACATGATACCGACCATAACGAAGAAGTACCAGAACGTGGTGATT
AGCACGGGCAACATCATCGCCACGGAACTGGGACAGCGCAAATCGAACGA
GGAGCTGTACGACGGCCTGAAGATAACGCTCCACACCGACTCGACTGCGG
AGCGCGTGGTGGTTGAAAAGGAGATCGACGAGCTGCATGGGCGGGTGCAA
AGGGCCACCCAGGAGTTGACCACCCGCTTGACGGAGAATGGACGGAATGA
GATAAGTATCGGTGCCAAGATATTCCTCAATCGCCACTCCACAGAGTCTG
TGAATCAGGCGGTGGAGGAGCTGCTCCACATACTTAGTGTGACGCACGTG
GACAATGTGGTGTTGGCCTACCACCCGAATGCGGTTGCCACCGCAACGCC
GGTGGCCACAACCAAACCGCCCTGTTCCGAGGATTCCAACGTCAGCAGGG
CTACAAACTGGAGCCAGCGCAATGGAAAGGAAGGAGTGGCAGAGCTGAAG
GAACTGTACAAAACACTGGAGCAATATGCCCTCAAGCAGCAGATTACACA
GCTGGGAATTGCCGATCTGGATGCGGCGGCGCTGGAGGAGCTACACAACA
GCGCACAGGTTGTGCCCACAATTGCCCAGGTCAACCTGTCTACGTGCTGC
GTGGTGCCACCAGAACTGCAGGAGTTCTGCACCGCTCACGACATCCAACT
GAACACGCACAGCGATCCCGAGCTCCTGCTGCCCGTGGAGCAGTTCGACG
GACTGGTCCCTGGCTACACAATCGACTGGACACT
MXO02494.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4919-PA | 858 | Gclm-RA | 1..776 | 9..784 | 3880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gclm-RB | 1505 | CG4919-RB | 160..936 | 8..784 | 3885 | 100 | Plus |
Gclm-RA | 1211 | CG4919-RA | 160..936 | 8..784 | 3885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22685575..22686351 | 784..8 | 3885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:04:52 has no hits.
MXO02494.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:33 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-PA | 1..776 | 9..784 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:27 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4919-PA | 1..776 | 9..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:20 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-RA | 152..936 | 1..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:08 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gclm-RA | 152..936 | 1..784 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:08 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22685575..22686354 | 1..784 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:20 Download gff for
MXO02494.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18511297..18512076 | 1..784 | 99 | | Minus |