MXO02495.3prime Sequence
882 bp (777 high quality bases) assembled on 2006-12-21
> MXO02495.3prime
ATGGTCTAGAAAGCTTGCAGCGGAAGCTGTGAGCAGGGCGGCATGGTAGG
CGATGTGTTCGGCGACGAACGTGGCGATGTAGAAGTAGCTGTGATCGTAT
CCCTCGCGCTGCTTGAAGATGGTCTGGATGTGATCATTGCCATCTGCGGC
AGCCAGCAGGTTCTCCGGCAGCAGCTGCTTGCCGGCCAGGAAGTTGTCTG
CTGCACCTTGGTCGATGAAGAGCTCCTGCGGAGTGCTCTCGTACTGCGAC
ACCAGATGCGTGGCATCCCACAGGGCCCAGTCATCCGGATTGGAGCCCAG
ATAGCCGGCAAAGGCCTTCTTGCCCCACGGGCACTCGGTGGGATTGGCAA
TCGGCGCAAAAGCGGACACCGACTGGTACAGCCCGGGATTCTTAAGCGCG
CAGATCAGGGCTCCGTGGCCGCCCATACTGTGGCCGAATATACCGCGTTT
ACCGGGAACCACGGGCAGATTGGCATTGACCACATCCACCAGCTCCTGGG
TCACATAGCTGTACATCTTGTAGTGCTTCGACCACGGCTCCTCCTTTGCA
TCCACATAGAATCCAGCCCCGCTTCCAAAGTCGTATGCATCATCTTGGCC
GGCAATTTCCACGCCCCTGGGCGAAGTGTCCGGATTGACGACGATCAGGT
TGTGGCGGGCGGCGTGCTGCTGGAATCCGCTCTTCTGGATGAAGTTCTCA
TGCGTGCAGGTCAGTCCGCTGAGGAAGAACAGCACCGGACACGGTTTACC
CTCCAAAGCGGCCGGCGGCAGGAAGACGCCAAAGGTCATGTCGCACTTCA
AGGTGTCCGAGCGATGGCGATACACGCGTTGCTCGCCCTCGAAGCACTTA
TTTGCGGACAGCTGTTCGAGCGTCATGTCGAC
MXO02495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4390-PB | 993 | CG4390-RB | 131..990 | 878..19 | 4300 | 100 | Minus |
CG4390-PA | 861 | CG4390-RA | 1..858 | 876..19 | 4290 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4390-RA | 1006 | CG4390-RA | 51..910 | 878..19 | 4300 | 100 | Minus |
CG4390-RB | 1141 | CG4390-RB | 186..1045 | 878..19 | 4300 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20056514..20057373 | 19..878 | 4300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:05 has no hits.
MXO02495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:35 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-PB | 127..993 | 16..882 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:28 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-PB | 127..993 | 16..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:18 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-RB | 197..1060 | 19..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:17 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-RB | 182..1045 | 19..882 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:17 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20056514..20057375 | 19..882 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:18 Download gff for
MXO02495.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15882236..15883097 | 19..882 | 99 | | Plus |
MXO02495.5prime Sequence
820 bp (738 high quality bases) assembled on 2006-12-21
> MXO02495.5prime
CAGTCGACATGACGCTCGAACAGCTGTCCGCAAATAAGTGCTTCGAGGGC
GAGCAACGCGTGTATCGCCATCGCTCGGACACCTTGAAGTGCGACATGAC
CTTTGGCGTCTTCCTGCCGCCGGCCGCTTTGGAGGGTAAACCGTGTCCGG
TGCTGTTCTTCCTCAGCGGACTGACCTGCACGCATGAGAACTTCATCCAG
AAGAGCGGATTCCAGCAGCACGCCGCCCGCCACAACCTGATCGTCGTCAA
TCCGGACACTTCGCCCAGGGGCGTGGAAATTGCCGGCCAAGATGATGCAT
ACGACTTTGGAAGCGGGGCTGGATTCTATGTGGATGCAAAGGAGGAGCCG
TGGTCGAAGCACTACAAGATGTACAGCTATGTGACCCAGGAGCTGGTGGA
TGTGGTCAATGCCAATCTGCCCGTGGTTCCCGGTAAACGCGGTATATTCG
GCCACAGTATGGGCGGCCACGGAGCCCTGATCTGCGCGCTTAAGAATCCC
GGGCTGTACCAGTCGGTGTCCGCTTTTGCGCCGATTGCCAATCCCACCGA
GTGCCCGTGGGGCAAGAAGGCCTTTGCCGGCTATCTGGGCTCCAATCCGG
ATGACTGGGCCCTGTGGGATGCCACGCATCTGGTGTCGCAGTACGAGAGC
ACTCCGCAGGAGCTCTTCATCGACCAAGGTGCAGCAGACAACTTCCTGGC
CGGCAAGCAGCTGCTGCCGGAGAACCTGCTGGCTGCCGCAGATGGCAATG
ATCACATCCAGACCATCTTTCAGCAGCGCGAGGGATACGATCACAGCTAC
TTCTACATCGCCCACGTCGT
MXO02495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4390-PB | 993 | CG4390-RB | 131..936 | 7..812 | 3980 | 99.7 | Plus |
CG4390-PA | 861 | CG4390-RA | 1..804 | 9..812 | 3970 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4390-RA | 1006 | CG4390-RA | 51..856 | 7..812 | 4000 | 99.8 | Plus |
CG4390-RB | 1141 | CG4390-RB | 186..991 | 7..812 | 4000 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20056568..20057373 | 812..7 | 4000 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:47 has no hits.
MXO02495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:37 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-PB | 125..944 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:28 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-PB | 125..944 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:06 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-RB | 195..1014 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:07 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4390-RB | 180..999 | 1..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:07 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20056560..20057377 | 1..820 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:06 Download gff for
MXO02495.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15882282..15883099 | 1..820 | 99 | | Minus |