MXO02496.3prime Sequence
368 bp (334 high quality bases) assembled on 2006-12-21
> MXO02496.3prime
ATGGTCTAGAAAGCTTGCTTCTGCGGTTAGTTTCTTTAACTTCTTGGGTG
TCTTAATATTAGGTGTTTTCTCCTTGGGCGACTTTCTCTTAAGGTTTTCC
TTCGGCTGGTGCTTAGTATTTACTTCTGGTTTCTTAATTTTAGGTGCTTC
TCCTTTTTCCGACTTGGACTTCTTATCGTTTTGTTTCGTACTCAGTGGAT
TCTTCTCTGGGGATTTCCCTTTCTCGGCCTTTCGCTTGAGCTTATTTTTA
GAGCTCCGCTTGTTCTGAGTGTTGAAGCGCAATATAAGTGGCGTGCCAGC
CAGGCTGAGCTTCTCCTTGATGGCCTTGCGTGCATCGTGGGTCGTTGGCA
GGGTTACGGTCGCCCGTG
MXO02496.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18178-PA | 1125 | CG18178-RA | 777..1122 | 364..19 | 1730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18178-RB | 1278 | CG18178-RB | 857..1202 | 364..19 | 1730 | 100 | Minus |
| CG18178-RA | 1310 | CG18178-RA | 889..1234 | 364..19 | 1730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9717862..9718207 | 19..364 | 1730 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 4696..4779 | 199..114 | 119 | 63.2 | Minus |
MXO02496.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:30:38 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-PA | 774..1125 | 18..368 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:29 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-PA | 774..1125 | 18..368 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:37 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-RA | 886..1234 | 19..368 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:25 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18178-RA | 886..1234 | 19..368 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:25 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9717862..9718210 | 19..368 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:37 Download gff for
MXO02496.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9710962..9711310 | 19..368 | 99 | | Plus |
