MXO02503.5prime Sequence
866 bp (765 high quality bases) assembled on 2007-04-13
> MXO02503.5prime
CAGTCGACATGGCGAGTGGCATTCCCCAAGCAGCAGGTAAACTGCCGGCA
ATTGCGAAGAAGGTGCAAAATCTCGGCGATATGGGCGTTTGGCAAAAATC
CCGCGCCTTCCACGATTTAATTGGATATATAAATGGCACCAGTTCGGCCA
TTCAGGGCATTAAAACCACAGACGAGATTTTCGAGTCGGAAATGCTCAAG
AAGCTGCTGCGGCTATTCGATGCACTGGAGAAATTGGTAGAGCAAAATCC
TCCATTGGAGCAGCCGCAGCGGTTCGGAAACAAAGCCTACAGGGATTGGG
CGCAGGCAATGCGGGAATTGTTGCCCGAACTCCTAGAACAGCTGTTGCCA
GACGACAAGAAGCGATACCATGTGGAGCTGGGGCAGTATCTCACTGAATC
TTTCGGCAATGCCACCAGGATCGACTACGGCACCGGCCACGAGCTGTCCT
TCCTCTTCTTCCTGTGCTCCCTGTTCAAGGCGGAGATCCTGCAGGAAAGG
GACATCGTGAGTGCTGCGCTGAGACTCTTCAATCGGTACCTTGAGCTCGC
CAGGCAAGCTGCAGCGAACATACAACATGGGAACCCGCTGGGAGCCAAGG
AGTCTGGTCGCTGGACGATTTCCAGTTCGTGCCCTTCATCTGGGGCAGTG
CACAGCTGGCGGTTAAGAGTCCCTTTGATCCCTCGAAGTTCGTGGACGAG
GCGATAATCACCGAGTACAAGGATCACTTCATGTTCATCAGTTGCATCGA
CTACATCTGCAAGGTCAAGACTGGACACTTTGGCGAGCACTCTAACCAGC
TGTGGAGCATCACGGATGTGCCAACATGGGCCAAGATCAACGCGGGACTA
GTTAAAATGTACCAAA
MXO02503.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5864-PA | 474 | AP-1sigma-RA | 1..370 | 9..378 | 1750 | 98.9 | Plus |
| CG5864-PA | 474 | AP-1sigma-RA | 380..471 | 388..479 | 460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptpa-RA | 1393 | CG3289-RA | 98..953 | 9..866 | 4180 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3377178..3377809 | 33..666 | 3040 | 99.4 | Plus |
| 2L | 23513712 | 2L | 3377861..3378065 | 662..866 | 1010 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:47 has no hits.
MXO02503.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:30 Download gff for
MXO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5864-PA | 1..474 | 9..483 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:13 Download gff for
MXO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptpa-RA | 98..950 | 9..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:49 Download gff for
MXO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptpa-RA | 98..950 | 9..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:49 Download gff for
MXO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3377099..3377126 | 9..36 | 92 | -> | Plus |
| 2L | 3377182..3377805 | 37..662 | 99 | -> | Plus |
| 2L | 3377862..3378062 | 663..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:13 Download gff for
MXO02503.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3377099..3377126 | 9..36 | 92 | -> | Plus |
| arm_2L | 3377182..3377805 | 37..662 | 99 | -> | Plus |
| arm_2L | 3377862..3378062 | 663..863 | 99 | | Plus |
