MXO02504.5prime Sequence
807 bp (794 high quality bases) assembled on 2007-04-13
> MXO02504.5prime
CAGTCGACATGGACCTGAAACAGCGCACATATCTCCTGGTGACCGGTGCA
TCACGTGGAATTGGCCGTGAGTTCGCCCAGCAGTTAGCCAAACGGATCAA
AGCCGAGGGTTCCATGGTGACGCTTCTGGGACGCAATCAAACCCTTTTGC
AGGAGTCTAAGGCAGAGATTGTCGCCACAGTGCCAGATCTATCCGTGCAA
ACCTATTCGCTGGAGCTGGAAACGGCCAAAACGGAGGACTTTACCAAGAT
TCTGGAGGCATCCGGTGGAAAGAACAATTTCGAGCGAGCCATAGTCATTC
ATAATGCCGGCACAGTGGGCGATACGTCAAAGAGGGCCAAAGAAATCGGA
GATACCGACTTCCTACAGCGCTACTACCACTCCAATGTCTTCTCGGCCAT
TTCGCTAAACTGCGAGTTTATGCGCGTCTTCAAGGGAATCCCAAAGTTGG
TGGTTAATCTCAGCACCTTGGCAGCCATTGCACCTATATCCTCGATGGCA
CACTATTGCACGGTGAAGGCAGCCCGTGAGATGTACTTCCGAGTGCTGGC
CACCGAGGAGTCCGCCGAGGACACCCTGGTGTTGAACTACGCGCCCGGCG
TCATAGACACACAGATGACCGTCCAGGTTCAGCGAGAGGCCCACGATCCC
GCCGTGGTCGCCATGTTTCGAGAGCAAAGGGAGTCCAAGACCATGCTGAC
TCCCGCCCAAACGACGGAGCGATTCATCAAAGTCCTGGAAGCATTCAAGT
TCAAGTCCGGCGATCATGTGGATTACAGGGATGAGCAGTTCGCAAGCTTT
CTAGACC
MXO02504.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12323-PB | 849 | Prosbeta5-RB | 1..843 | 9..851 | 4215 | 100 | Plus |
| CG12323-PA | 849 | Prosbeta5-RA | 1..843 | 9..851 | 4215 | 100 | Plus |
| CG31742-PA | 840 | CG31742-RA | 478..523 | 492..537 | 155 | 93.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sptr-RA | 1143 | CG12117-RA | 132..915 | 8..791 | 3920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8463524..8464307 | 791..8 | 3920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:33 has no hits.
MXO02504.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:31 Download gff for
MXO02504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12323-PA | 1..843 | 9..851 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:23 Download gff for
MXO02504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 124..920 | 1..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:29 Download gff for
MXO02504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sptr-RA | 124..920 | 1..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:29 Download gff for
MXO02504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8463519..8464311 | 1..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:23 Download gff for
MXO02504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8357552..8358344 | 1..798 | 99 | | Minus |
