MXO02505.5prime Sequence
919 bp (753 high quality bases) assembled on 2007-04-13
> MXO02505.5prime
CAGTCGACATGTATTACTTGTGCATTTTCCTGTGGGTCACTTCAGTGGCA
TGTCAGACCTCCAAAGAGATCTACCAACTACTTTCCAAGAGCCATACAAA
CCAGAACCTCGTCGTCTCGCCCGTCTCCATAGAGACCATCCTTAGCATGG
TCTTCATGGGCGCAGAAGGCTCGACGGCCAAGGAGCTGCAGAGCGCCTTA
GGTTTACCATCGGAGGACAAAGAGGCGGTGGCAGCCAGGTACGGTGCTCT
CCTCAACGATCTTCAGGGACAGGAGGAGGGACCCATACTAAAGCTCGCGA
ATCGCATCTACGTCAACGACCAGTACAGCCTGAATCAGAACTACAACCTC
GCTGTGAGGGAACCCTTCAAGTCCGAGGCGGAGTCCATTAGTCTGACCAA
TGGCCCTGTGGCGGCCGAGAGAATCAACCAGTGGGTGCTGGATCAGACCA
GTGGTAAAATCAAGGGCATGATCGATCCCGGCAGCATGACGTCCGACGTG
AAGGCCTTGCTGGTGAACGCCATCTACTTTAAGGGCCAGTGGGAGTCGAA
GTTTGACCCAGCTAAGACCAGAGCCTCCACCTTCCAAGTAACTGCGAACA
AGAGTGTGCCCGTCCAGATGATGGCGCAAATGGGAACATTCAGGGCTAAC
TACTTCCGCGATCTAGATGCCCAAGTCATCGAGCTGCCGTACCTTAACTC
CAACCTGTCCATGACTATCTTTCTGCCCCGAGAAGTGGAGGGCTTGAGCG
CCCTGGAAGAGAAGATCGTTGGCTTCGCCAGGCCGCTGGTTGCCAAGGAG
GTCTATCTTAAGCTGCCCAAGTTTAAAATCGAATTTCGTGATGAACTCAA
AGAGACCTTAGAGAAGCTGGGCATCCGAGAGCTATTTCACCGACAGTCAG
ACTTAAGCGGCTTGTTCGC
MXO02505.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11981-PA | 618 | Prosbeta3-RA | 1..615 | 9..623 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn42Dd-RB | 1195 | CG9456-RB | 51..961 | 9..919 | 4510 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6883614..6884458 | 22..866 | 4225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:21 has no hits.
MXO02505.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:31 Download gff for
MXO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11981-PA | 1..618 | 9..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:32 Download gff for
MXO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn42Dd-RB | 44..961 | 1..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:12 Download gff for
MXO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn42Dd-RB | 44..961 | 1..919 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:12 Download gff for
MXO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6883614..6884458 | 22..866 | 100 | -> | Plus |
| 2R | 6884517..6884569 | 867..919 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:32 Download gff for
MXO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2772022..2772074 | 867..919 | 96 | | Plus |
| arm_2R | 2771119..2771963 | 22..866 | 100 | -> | Plus |
