MXO02509.5prime Sequence
597 bp (597 high quality bases) assembled on 2007-04-13
> MXO02509.5prime
CAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAACTCTCAAC
TATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACCCAGCAGCA
ACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCAGCACCTAA
AATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATACTCGATGCG
TGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACGTCCGGAAA
CCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTTCCGACGCA
TGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCAACACCCGC
AACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTGGTGATCCT
ACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAATCTGGGAC
TGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAATCAGTACC
AGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGCGTCCGGGT
GATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCTAGACC
MXO02509.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6948-PA | 660 | Clc-RA | 1..657 | 9..665 | 3210 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8206-RB | 1188 | CG8206-RB | 174..746 | 9..581 | 2865 | 100 | Plus |
| CG8206-RA | 1013 | CG8206-RA | 174..746 | 9..581 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15739403..15739975 | 9..581 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 147..192 | 113 | 71.7 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 147..192 | 113 | 71.7 | Plus |
MXO02509.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:32 Download gff for
MXO02509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6948-PA | 1..660 | 9..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:15 Download gff for
MXO02509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8206-RA | 168..746 | 1..581 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:32 Download gff for
MXO02509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8206-RA | 168..746 | 1..581 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:32 Download gff for
MXO02509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15739397..15739975 | 1..581 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:15 Download gff for
MXO02509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15633430..15634008 | 1..581 | 99 | | Plus |
