MXO02510.5prime Sequence
672 bp (672 high quality bases) assembled on 2007-04-13
> MXO02510.5prime
CAGTCGACATGGCTGCGCCGGTCATTGTCGAGGCCACGGTCAAGCAAACC
GCCACGCTGATCTTCATGCACGGCCTGGGTGATACGGGTCATGGCTGGAG
CAGTGCCCTAGCCGCCATCCGCCCACCTTTCATGAAAGTCATCTGCCCCA
CGGCGCCCACACAGCCCGTTTCGCTGAACGCCGGCTTCCGCATGCCGTCG
TGGTTTGACCTGAAGACGCTGGACATCGGTGGGCCCGAGGACGAGCCGGG
CATCCAGTCGGCGCGTGATAGTGTGCACGGTATGATCCAGAAGGAGATTA
GCGCTGGGATTCCGGCCAATCGCATTGTCCTGGGCGGATTCTCGCAGGGC
GGAGCCTTGGCACTGTACTCGGCACTCACGTACGATCAGCCGCTGGCCGG
CGTGGTGGCCCTATCCTGTTGGCTGCCGCTGCACAAGCAGTTCCCAGGCG
CCAAGGTGAACAGCGATGATGTGCCGATTTTCCAGGCGCATGGCGACTAC
GATCCCGTGGTGCCGTACAAATTCGGCCAGCTGAGCGCCAGCCTGCTCAA
GTCGTTCATGAAGAATGTGACGTTCAAGACGTACAGTGGACTATCGCACT
CGTCGTCCGACGACGAAATGGATGACGTCAAGGACATCATCAGTAAATGG
GTAAACGCAAGCTTTCTAGACC
MXO02510.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2746-PA | 612 | RpL19-RA | 1..609 | 9..617 | 3020 | 99.8 | Plus |
| CG2746-PB | 612 | RpL19-RB | 1..609 | 9..617 | 3020 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18815-RC | 1181 | CG18815-RC | 143..793 | 6..656 | 3255 | 100 | Plus |
| CG18815-RB | 1237 | CG18815-RB | 199..849 | 6..656 | 3255 | 100 | Plus |
| CG18815-RA | 1247 | CG18815-RA | 209..859 | 6..656 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11628960..11629505 | 88..633 | 2730 | 100 | Plus |
| 3L | 28110227 | 3L | 11628451..11628505 | 6..60 | 260 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:42:57 has no hits.
MXO02510.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:33 Download gff for
MXO02510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2746-PB | 1..612 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:41 Download gff for
MXO02510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18815-RA | 204..865 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:54 Download gff for
MXO02510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18815-RA | 204..865 | 1..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:54 Download gff for
MXO02510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11628446..11628501 | 1..56 | 96 | -> | Plus |
| 3L | 11628563..11628594 | 57..88 | 100 | -> | Plus |
| 3L | 11628961..11629504 | 89..632 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:41 Download gff for
MXO02510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11621546..11621601 | 1..56 | 96 | -> | Plus |
| arm_3L | 11621663..11621694 | 57..88 | 100 | -> | Plus |
| arm_3L | 11622061..11622604 | 89..632 | 100 | -> | Plus |
