MXO02512.5prime Sequence
728 bp (725 high quality bases) assembled on 2007-04-13
> MXO02512.5prime
CAGTCGACATGAACCGTCGCCTTCCAGGAACCATCAGCCAGTGCCAGAAG
CTTCTCCTAGCCACCCACAACCATGCTCCAACGGCCTTCTCCACCAGATT
CCTGTCCACATCTCGAGTGAACCGCGAGCGGCAAGAATGCCAAGTGCTGG
TTGTGGGCGGTGGCACCGGTGGGTGTGCCATGGCCGCCAAGTTGTCCTCA
CGTTTGGGCAGCGACAAGGTGGTCGTCCTGGAACCGGAAGATAAACATTA
CTACCAACCCATGTTCACCCTAATAGGAGGTGGTATGAAGAGATTGGATC
AGAGCCACCGCCAAATGGCCGATGTGCTGCCCACAAAGGCCAAATGGGTG
AAGGAGAAGGCTCTGGACTTCGATCCGGATAATAATACGGTTAGCACTTC
TGGTGGCAAGACCATCAAGTACGACTTCCTGATCATCGCCACCGGACTGC
AGCTCAATTATGGAAAGATACCTGGCCTGGTGGAGGCCCTGGAGACCCCC
GACAGTAATGTTTGCTCCATCTACTCGCCCAAGTACGTGGATCATGTGTA
CGAATGTCTGCGCAGGACCAACAAAGGAAATGCTATATTCACGTTTCCCA
ATTGTCCCATTAAGTGTGCAGGTGCACCGCAGAAAATCGCCTATATATCT
GAGCACTACTTTAGGAAGATGGGTCGTCGCGACAACGTCAATATCATCTA
CAATACATCGCTTCCCGTGATTTTTGGT
MXO02512.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5730-PD | 975 | AnnIX-RD | 381..802 | 389..810 | 2110 | 100 | Plus |
| CG5730-PA | 975 | AnnIX-RA | 381..802 | 389..810 | 2110 | 100 | Plus |
| CG5730-PB | 975 | AnnIX-RB | 381..802 | 389..810 | 2110 | 100 | Plus |
| CG5730-PC | 975 | AnnIX-RC | 381..802 | 389..810 | 2110 | 100 | Plus |
| CG5730-PD | 975 | AnnIX-RD | 1..370 | 9..378 | 1850 | 100 | Plus |
| CG5730-PA | 975 | AnnIX-RA | 1..370 | 9..378 | 1850 | 100 | Plus |
| CG5730-PB | 975 | AnnIX-RB | 1..370 | 9..378 | 1850 | 100 | Plus |
| CG5730-PC | 975 | AnnIX-RC | 1..370 | 9..378 | 1850 | 100 | Plus |
| CG9968-PA | 969 | Anxb11-RA | 307..352 | 333..378 | 155 | 93.4 | Plus |
| CG9968-PB | 1536 | Anxb11-RB | 874..919 | 333..378 | 155 | 93.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14997-RA | 1605 | CG14997-RA | 89..808 | 9..728 | 3570 | 99.7 | Plus |
| CG14997-RB | 1676 | CG14997-RB | 160..879 | 9..728 | 3570 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4240952..4241180 | 243..471 | 1100 | 98.7 | Plus |
| 3L | 28110227 | 3L | 4241233..4241435 | 466..668 | 1015 | 100 | Plus |
| 3L | 28110227 | 3L | 4240396..4240523 | 9..136 | 640 | 100 | Plus |
| 3L | 28110227 | 3L | 4240786..4240891 | 137..242 | 530 | 100 | Plus |
| 3L | 28110227 | 3L | 4241492..4241553 | 667..728 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:07:14 has no hits.
MXO02512.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:34 Download gff for
MXO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5730-PB | 1..801 | 9..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:51 Download gff for
MXO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14997-RB | 152..879 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:17 Download gff for
MXO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14997-RB | 152..879 | 1..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:17 Download gff for
MXO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4240388..4240523 | 1..136 | 97 | -> | Plus |
| 3L | 4240786..4240891 | 137..242 | 100 | -> | Plus |
| 3L | 4240952..4241176 | 243..467 | 99 | -> | Plus |
| 3L | 4241235..4241435 | 468..668 | 100 | -> | Plus |
| 3L | 4241494..4241553 | 669..728 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:51 Download gff for
MXO02512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4240388..4240523 | 1..136 | 97 | -> | Plus |
| arm_3L | 4240786..4240891 | 137..242 | 100 | -> | Plus |
| arm_3L | 4240952..4241176 | 243..467 | 99 | -> | Plus |
| arm_3L | 4241235..4241435 | 468..668 | 100 | -> | Plus |
| arm_3L | 4241494..4241553 | 669..728 | 100 | | Plus |
