MXO02513.5prime Sequence
618 bp (618 high quality bases) assembled on 2007-04-13
> MXO02513.5prime
CAGTCGACATGGCCATGGACGACCCCGATGATGACATGAGCAGCGTGGGC
GTGACCACGGCCCGAATCGAGAACCAGCACCAACAGCACCCCCACCAGCA
GGGTCAGCATGGACACCACCAACAGGGCCAGGGTCAAAGCCAGTACAGCG
CAGGGGCGGTCAAAGTGGGCGGATGGCGATACGAGGACGCCAGTCGCTAC
ATCGGCGAGTGGAACCAGCGTGGCCAAAAGCACGGCATCGGGCATCTGCA
GTTCGCCGATGGCACCCGCTACGATGGGCAGTTCCAGGAGGGTCTTAGTC
AAGGAGTGGGCTGCCTCTGGTTCGCGGATGGAGCAAAATACGAAGGCGAG
TTTCATCAGGGCTGGTTTCTTGGTAACGGGATCTTCTGGAGAGCCGATGG
AATGAAGTACGAGGGCGAGTTTCGAGGCGGCAAGATCTGGGGCCTGGGAT
TGCTGACGTTCCAGGACTTCACGCACGGCTTTCCCAGAAACGAGGGATTC
TTTCAAGACTGCCGCTTTATGAGACGACGTCGATGTCCCGAGGTGGTGCA
GCGTGCACAAAAGTGCGCTCTTATGGCCCGTTCCCAGTGCGAACACCCAT
ACGCAAGCTTTCTAGACC
MXO02513.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-PB | 333 | CG12659-RB | 1..330 | 9..338 | 1600 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rtp-RA | 960 | CG10233-RA | 57..650 | 9..602 | 2910 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5236873..5237173 | 337..37 | 1505 | 100 | Minus |
| 3R | 32079331 | 3R | 5236402..5236666 | 602..338 | 1295 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 22:01:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2369 | 73..131 | 106 | 64.4 | Plus |
MXO02513.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:35 Download gff for
MXO02513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-PB | 1..333 | 9..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:15 Download gff for
MXO02513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rtp-RA | 52..654 | 1..606 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:51 Download gff for
MXO02513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rtp-RA | 52..654 | 1..606 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:51 Download gff for
MXO02513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5236398..5236666 | 338..606 | 98 | <- | Minus |
| 3R | 5236873..5237173 | 37..337 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:15 Download gff for
MXO02513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1062120..1062388 | 338..606 | 98 | <- | Minus |
| arm_3R | 1062595..1062895 | 37..337 | 100 | <- | Minus |
