MXO02522.5prime Sequence
780 bp (90 high quality bases) assembled on 2007-04-13
> MXO02522.5prime
CAATCGACATGTCGCTCCGTGTGATGTCCCCCGCTATGCTGAATGCCTGG
AGCCAGACCCTCGTGAGGGCCATGTCCACCCAGGGCGGAGCCAAGAACAT
CTGCTTCGTGGGTCTGGGCAACATGGGTGCCAACATGGCCAGCAATCTAA
TCAAGGCCGGCCACAAGCTGCATGTCTTCAATATCTCCAAGCCCGCCTGC
GATGGTCTGGCCGCCAAGGGAGCCACCGTCTACGCAAAGACCTCGGAGCT
GGCCAAGAACTCGGACTTTGTGATCACCATGCTGCCGAACAATGCCATTG
TGGATGCCTCCTACAATGAGATGACTGCCGATGGCGTCAACAAGGACACC
ATCTTCATTGACTCCTCGACTATCTCGCCGGATTTGGTCAAGTCGTTGCA
GAAGAAGATCAGCGCCAAGGGAGCTCGGTTTATCGATGCCCCCGTTTCCG
GCGGATTTCCCGGCGCCGAGCAGGCCACCCTCACCTTCATGGTGGGCGGC
ACCGAGGCGGAGTACAATGCCGTCAAGGCCGACCTAGAGTGCATGGGCAA
GAACATCACCCACTGCGGCGTCTATGGCATGGGCCAGGCCGCCAAGCTGT
GCAACAACATGATGCTGGCCATCTCGATGATCGGAGTTTCGGAGGCCATG
AATCTGGCGGTGCGCCAGGGACTCGATGCCAATGTCTTCTCCGAGATCAT
CAAATCCTCCACCGGACGCTGCTGGGCCTCGGAGATCTACAACCCTGTGT
CCGGAGTCTGCCCCAGTGCCCCATCCAACA
MXO02522.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9375-PA | 570 | Ras85D-RA | 1..567 | 9..575 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15093-RE | 1255 | CG15093-RE | 97..871 | 6..780 | 3650 | 98.1 | Plus |
| CG15093-RA | 1310 | CG15093-RA | 152..926 | 6..780 | 3650 | 98.1 | Plus |
| CG15093-RB | 1243 | CG15093-RB | 85..859 | 6..780 | 3650 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18776053..18776827 | 780..6 | 3650 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:54 has no hits.
MXO02522.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:38 Download gff for
MXO02522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9375-PA | 1..570 | 9..579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:18 Download gff for
MXO02522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15093-RB | 80..858 | 1..779 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:53 Download gff for
MXO02522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15093-RB | 80..858 | 1..779 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:53 Download gff for
MXO02522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18776054..18776829 | 1..779 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:18 Download gff for
MXO02522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14663559..14664334 | 1..779 | 97 | | Minus |
