MXO02524.5prime Sequence
504 bp (504 high quality bases) assembled on 2007-04-13
> MXO02524.5prime
CAGTCGACATGCCTCCTGCATCCTATACGATCGTGCTGAAGAGCCTCTCC
GTGCTGCTGGGCCTCTTCTTCATCTTCGTGGGCACCCTCAAGCTGACGCC
GCACATTAGCAAGGATCTCTACAAGGACCTGCGCACAGAGTACGTGAAGT
ATGCCAAAGTGTTCCCACTAACGGCGCTCTTCGGAGTGAAGATACCCTCG
AAATGGTACCGCCGCACCGTTGGCATCCTGGAGATCGTCTGCGGCCTGGC
CATGGCGCTGATTCCCTATCATAAGGTCAAAAACACGGCCAACGTTACGC
TGCTGGTGTTGATGCTCCTGGGCATCTACCAGCACTGGATGGTCAGTGAT
CCGTTCGAGCGCTCCGGTCCGGCGCTGGTCTTCACCTTCATGCTGGGCGG
ACGCCTGGTGGTCTGGTACCAGACCGCCCGCCTCCAGGACGAGGCCACGA
CGGCAGCGCAGCCTGCTGCGAACGGCGTAAAGCAGGACGCAAGCTTTCTA
GACC
MXO02524.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3035-PA | 1248 | cm-RA | 380..792 | 388..800 | 2065 | 100 | Plus |
| CG3035-PA | 1248 | cm-RA | 1..368 | 9..376 | 1840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13920-RC | 1292 | CG13920-RC | 442..921 | 9..488 | 2385 | 99.8 | Plus |
| CG13920-RA | 1156 | CG13920-RA | 306..785 | 9..488 | 2385 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1650913..1651130 | 271..488 | 1090 | 100 | Plus |
| 3L | 28110227 | 3L | 1650713..1650857 | 131..275 | 710 | 99.3 | Plus |
| 3L | 28110227 | 3L | 1649385..1649507 | 9..131 | 600 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:18 has no hits.
MXO02524.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:39 Download gff for
MXO02524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3035-PA | 1..792 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:18 Download gff for
MXO02524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13920-RA | 380..859 | 9..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:39 Download gff for
MXO02524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13920-RA | 306..785 | 9..488 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:39 Download gff for
MXO02524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1649385..1649507 | 9..131 | 99 | -> | Plus |
| 3L | 1650714..1650852 | 132..270 | 100 | -> | Plus |
| 3L | 1650913..1651130 | 271..488 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:18 Download gff for
MXO02524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1649385..1649507 | 9..131 | 99 | -> | Plus |
| arm_3L | 1650714..1650852 | 132..270 | 100 | -> | Plus |
| arm_3L | 1650913..1651130 | 271..488 | 100 | | Plus |
