MXO02529.5prime Sequence
744 bp (744 high quality bases) assembled on 2007-04-13
> MXO02529.5prime
CAGTCGACATGGACGCGAAGACGCTGATACTGTTGACCGTGGCCGTGGCC
ATATTCGCCTGCCACACGATCGCACAGCCACATTACATTGAGGTGTCCGA
GGAATCAGAGGAATGGTGTCCACCAGAAAATAACAATACCGATAATAACA
ATCCGAATAGAACCGATCACGACTCCGCCCTGTGCGCCAACTTCCAGCAC
ATTCGCGCTATGATCAATCAGGAGGCCCTGCTCAATCTGATCGAGGTGCA
CTACAATTGTGATCTGAAGTTCCGCCGCGCCATGCGGTACTACAACACAG
CCGGATTCGAGAGGACCACCCAGCAGCTCACGGATACGGATGCCTACAAG
ACCGTTCTCAAGGAACTGCTTTCGGACACCGTGGATACCGCCGACATTGA
GACCGTGGCGGATATCTTCCATTGCATCATACTGCCCGTCCGCCAGCCCG
ATCGCAACTGCGACTGCAAGGCCGTGAAGCACCACACCTTCGTCGGCGAT
CTGCTCTCCATCATGCCGAAGCAGGAGGTGCACAACTATGTGGCACAGTC
CCAGGCGAATCACACCAACTTCGGCAACTTCACCAAGGCGGTGGTCTCCA
AGCAATTCCAGGCCACGCTCAAGGCCAACATTAACAAGCGCGACGTGGTG
AAGCCACTGCGCACCCTGCGCAAGAACGGCTGGGACATCCCAGAGCTGCT
ACGCGCCATGCTGACCATCTTCCAGTGGGCAAGCTTTCTAGACC
MXO02529.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6842-PA | 1329 | CG6842-RA | 1..864 | 9..872 | 4295 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3906-RA | 849 | CG3906-RA | 26..745 | 9..728 | 3525 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23511577..23512200 | 632..9 | 3045 | 99.2 | Minus |
| 2R | 25286936 | 2R | 23511390..23511485 | 728..633 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:11:33 has no hits.
MXO02529.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:42 Download gff for
MXO02529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6842-PA | 1..864 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:32 Download gff for
MXO02529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3906-RA | 17..745 | 1..728 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:22 Download gff for
MXO02529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3906-RA | 17..745 | 1..728 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:22 Download gff for
MXO02529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23511390..23511485 | 633..728 | 100 | <- | Minus |
| 2R | 23511577..23512205 | 1..632 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:32 Download gff for
MXO02529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19398913..19399008 | 633..728 | 100 | <- | Minus |
| arm_2R | 19399100..19399728 | 1..632 | 98 | | Minus |
