MXO02530.5prime Sequence
621 bp (621 high quality bases) assembled on 2007-04-13
> MXO02530.5prime
CAGTCGACATGCGCTTTAACAACCCGGAAGTGAACTCCCTGGCCAGCAAT
CCAGCAACGCGATTCGACAAGGAGGGCCTGCTCATCATCACCGATCGCCA
GGAGGGCTTCCTGTGGCGCTCTAGCGAAGTCAGAGTTGAACGTTGGTGTA
AACTGCGTGGAAATTTACTGTTCTACCTCAAGGATAAGGACCCCAAGTCA
GCGGTGGCCGGCCTCCTGGTGCTGGAGAACTGTCGTGCGCGCATTCAGAA
TGAGGAGCGTGATTCCGAGGGCTACGTATTCGATTTAGACTTCAAGGACA
GCCCATCGGAACGTTTCATTACACGTTCGTCGGCCGAACGCCTGGCCTGG
GTGCAGTGCATCGAGCACGCATCCACCGAGAAGCTAAACGCGCTCATACG
CCAGCTAAAGGAACAGATTGTTAGCCAGAGCCGCCAGCCCAGCAGCGGGG
CGTCATCCTCCATGGGCAATCACATTGACCTCGGCATGCCGCTGGAGCAG
CAAATGCAGGAGCAGCTACAGCTGCACGGCCAGCCGGCGGAGGAGTTGTC
CGTGCCCGTGCCCACGGAGGTGGTGGCGCCGTTTGAAGGTGATCTTATAC
AGTTCGCAAGCTTTCTAGACC
MXO02530.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4265-PA | 684 | Uch-RA | 1..681 | 9..689 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42271-RB | 1352 | CG42271-RB | 313..910 | 8..605 | 2945 | 99.5 | Plus |
| CG42271-RC | 4403 | CG42271-RC | 313..893 | 8..588 | 2860 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14232724..14233042 | 605..287 | 1580 | 99.7 | Minus |
| X | 23542271 | X | 14233105..14233265 | 288..128 | 805 | 100 | Minus |
| X | 23542271 | X | 14233421..14233542 | 129..8 | 580 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:58 has no hits.
MXO02530.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:42 Download gff for
MXO02530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4265-PA | 1..684 | 9..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:19 Download gff for
MXO02530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42271-RB | 309..913 | 1..609 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:54 Download gff for
MXO02530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42271-RB | 309..913 | 1..609 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:54 Download gff for
MXO02530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14232721..14233040 | 289..609 | 99 | <- | Minus |
| X | 14233105..14233263 | 130..288 | 100 | <- | Minus |
| X | 14233421..14233546 | 1..129 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:19 Download gff for
MXO02530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14126754..14127073 | 289..609 | 99 | <- | Minus |
| arm_X | 14127138..14127296 | 130..288 | 100 | <- | Minus |
| arm_X | 14127454..14127579 | 1..129 | 96 | | Minus |
