MXO02542.5prime Sequence
744 bp (744 high quality bases) assembled on 2007-04-13
> MXO02542.5prime
CAGTCGACATGCAGGACCCAAACCAAGATACCGAGTGGAATGATGTGCTC
CGAGCCAAGGGAATAATTGGGCCCAAGGCGAAGGAGGCGGAGATCACAGA
GGATCAGATCCAGAAGCTGATGGACGATGCCATCCAGCGGCGCACAGATC
TGCCACTGAATGAAGGCCAGCGCGACAAGAAGATCGACGACATGTCGCTG
GACGAACTCGACGAACTGGAGGATTCCGAGGACGAGGCTGTTCTAGAGCA
GTATCGCCAGCGACGCATCGCCGAGATGAGGGCCACCGCTGAAAAGGCGC
GATTTGGATCAGTGCGCGAGATCTCAGGACAGGATTATGTCAACGAGGTA
ACCAAGGCCGGCGAGGGCATCTGGGTGGTACTCCACCTGTATGCCAACGG
CGTACCGCTGTGCGCACTGATCCACCATCACATGCAGCAGCTGGCCGTCC
GCTTTCCACAGACCAAGTTCGTGCGCTCCGTTGCCACCACCTGCATACCA
AACTTCCCCGAGAAGAACCTGCCCACCATCTTTATCTACCACGAGGGTGC
GCTGCGCAAGCAGTACATAGGCCCACTGGAGCTGCGCGGCGACAAGTTGA
CCGCTGAGGAGCTGGAGTTTATGCTGGGTCAGGCGGGAGCAGTGCCCACC
GAGATCACGGAGGATCCACGGCCGCAGATCAGGGACAAGATGCTTGCCGA
TCTCGAAGACAAAAGCTCGGACTTCTACGCAAGCTTTCTAGACC
MXO02542.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:09:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12276-PA | 1014 | Aos1-RA | 1..900 | 9..908 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| viaf-RA | 1158 | CG18593-RA | 134..855 | 7..728 | 3595 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11992156..11992871 | 728..13 | 3565 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:40 has no hits.
MXO02542.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:47 Download gff for
MXO02542.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12276-PA | 1..900 | 9..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:38 Download gff for
MXO02542.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 128..855 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:43 Download gff for
MXO02542.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| viaf-RA | 128..855 | 1..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:43 Download gff for
MXO02542.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11992156..11992877 | 3..728 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:38 Download gff for
MXO02542.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11985256..11985977 | 3..728 | 99 | | Minus |
