MXO02557.5prime Sequence
835 bp (745 high quality bases) assembled on 2007-04-13
> MXO02557.5prime
CAGTCGACATGATCCAGCTGCTCCAGTTGCTTCTATGTACTATTCCACTC
GTTGTGGGCGAGGTTCTGCCCCTGCAACTCGATTTGGACAACAGTCAAAT
TACCATACGGCGAAGTGCCAGTCGCGATGACAAATTGCAGGTATTCCACA
GCATCTGGGGCGCCATTCGCTCCGACTTCGCCACCGATACGGACAAGGTG
AAGGGCCTGTACAGTCAGCTGGGCGGATATATTCGCGACGATGTGCAGTG
CAGTAGCGGCTCCACGGGTCGATCTGCCTGCGAGCTGCAGCAGGAGGTGC
GACGCCACCTGCGGACCCTCATGGCCCAGCGGCTGGCCAATCTGTTGAAC
GCCGAGGAGAGCATTCAGACATACGGTATGTACATAGCGGCCAGTGTGGA
GCCCGCCCTGGTCAGGGACATTCTGGTGCACGCCATCGAGGACGTGTACT
TCCATCGACCGCTGGAGAAGCTGGTGCAGCAGCTGGAGCAACTGTACGCG
GATCGCGACGAGGTCAGCTTTCGCACGATGATCGAGGCGCAATTGGCGCT
CTTCTGGCGCTATCAGGCCATGCAGGACAGCAGCGAGGCGTACCTGTTCA
ACGTCGCGCACATGGTCAGCAAGATCCGGAGCCATCACATGTACGCCAGC
GTCGATGCGGATCTCCAGAAGCGAGTGGAGGCATTGAGCCAACGTCTGCC
GCCCGTTCTAGACTTGCTCTTCGATCCGCAGGGATTCTGCCTGCTGAGTC
GCTCCGATCGCGAGTACATCTACACGACCATAACGGACGAGTGGAACTAC
GGTCTGAATGGGCGGCAGATGTTCTCCTGGCGCGA
MXO02557.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7001-PA | 1452 | Pk17E-RA | 1..940 | 9..948 | 4700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42512-RA | 1782 | CG42512-RA | 496..1322 | 9..835 | 4120 | 99.9 | Plus |
| CG32573-RC | 1332 | CG32573-RC | 46..872 | 9..835 | 4120 | 99.9 | Plus |
| CG32573-RA | 1782 | CG32573-RA | 496..1322 | 9..835 | 4120 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16652079..16652815 | 99..835 | 3670 | 99.9 | Plus |
| X | 23542271 | X | 16651927..16652016 | 9..98 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:58 has no hits.
MXO02557.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:53 Download gff for
MXO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7001-PA | 1..939 | 9..947 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:19 Download gff for
MXO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1321 | 1..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:51 Download gff for
MXO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32573-RA | 489..1321 | 1..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:51 Download gff for
MXO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16651920..16652016 | 1..98 | 96 | -> | Plus |
| X | 16652079..16652814 | 99..834 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:19 Download gff for
MXO02557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16545953..16546049 | 1..98 | 96 | -> | Plus |
| arm_X | 16546112..16546847 | 99..834 | 99 | | Plus |
