MXO02558.5prime Sequence
726 bp (726 high quality bases) assembled on 2007-04-13
> MXO02558.5prime
CAGTCGACATGCCTTTTGTCCGACCGCTGGTGACCGTGGTGCGGGCCGGG
CGGCATAGCTATTCAGCAGGATTACAGCTACAGCAACGTCTTGCAAGGTC
CAACCAGATCCTGAATCCGCCAGCGGAGTTCCGAAACTACCTGGTGCTTC
AGGAGCACGACCCGGTCTACACAGTCGGACTAAGGACAAAGGACTATACG
GCGCAGGATGAAGACCGACTCCGCCGGCTAGGAGCAGACTTCCATCGCAC
AGATCGCGGTGGCTTGATCACATTTCACGGCCCCGGCCAGTTGGTGGCCT
ATCCCATTCTGCACCTGGGTCAGTTCGTGCCGAGCATCCGCTGGTACGTG
GCGACGTTGGAGCGGATGGTTGTCGAGGCCTGCCACCAGATGGGCATTTC
CAGTGCCAAGGCGACCAAGGACACCGGTATCTGGGTGGGTGACAACAAGA
TCTGTGCCATCGGTATCCACGGCTCGCGTTACGTCACCACGCATGGAATC
GGCCTCAATTGCTGCACGGATCTGCAGTGGTTTGAGCACATTGTGCCCTG
CGGAATCGAAGGCAAGGGGGTCACCTCGCTCAGCAAAGAGCTGGACAGAC
ATTTTCCTGTCGAGGAGGCCAGTGGCGCACTCCTCAATAGTTTCGCTAAA
GTTTTCGAATGCCGCCTTCAGGAACACGCCAAAAAACCAGCAAGTTCTGC
TGAAATCGGAGCAAGCTTTCTAGACC
MXO02558.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15141-PA | 1215 | CG15141-RA | 1..614 | 9..622 | 3070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9804-RB | 943 | CG9804-RB | 58..759 | 9..710 | 3510 | 100 | Plus |
| CG9804-RA | 1108 | CG9804-RA | 223..924 | 9..710 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4436406..4437107 | 710..9 | 3510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:19:32 has no hits.
MXO02558.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:54 Download gff for
MXO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-PA | 1..614 | 9..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:04:14 Download gff for
MXO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9804-RA | 223..927 | 9..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:08 Download gff for
MXO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9804-RA | 223..927 | 9..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:08 Download gff for
MXO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4436403..4437107 | 9..714 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:04:14 Download gff for
MXO02558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 262125..262829 | 9..714 | 99 | | Minus |
