MXO02559.5prime Sequence
619 bp (619 high quality bases) assembled on 2007-04-13
> MXO02559.5prime
CAGTCGACATGGCAAGTCACACGCTTTTTGTGTTTACAGGAGAACGAGTA
CTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAAGTTTCCC
GGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAAGCCGGCC
AAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGGAGCCAGC
TTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGACGCCATTC
GGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGTGCCTCCG
CACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAATCCTAAC
CGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCGAAAAAAC
AACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACTACAGACT
GCTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTGCCCGCCA
GCTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCGGAATGCA
CTTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAAGCCCCTCTAAG
TGGGCAAGCTTTCTAGACC
MXO02559.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10961-PA | 1428 | Traf2-RA | 1..798 | 9..806 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 1044 | CG18004-RA | 317..879 | 40..602 | 2815 | 100 | Plus |
| CG18004-RB | 1168 | CG18004-RB | 441..1003 | 40..602 | 2815 | 100 | Plus |
| CG18004-RD | 1026 | CG18004-RD | 317..861 | 58..602 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10885560..10886153 | 9..603 | 2925 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:33 has no hits.
MXO02559.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:54 Download gff for
MXO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10961-PA | 1..798 | 9..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:25 Download gff for
MXO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 40..602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:16 Download gff for
MXO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RB | 441..1003 | 40..602 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:16 Download gff for
MXO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10885560..10886156 | 9..607 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:25 Download gff for
MXO02559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6773065..6773661 | 9..607 | 99 | | Plus |
