Clone MXO02562 Report

Search the DGRC for MXO02562

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:25
Well:62
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG9689-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02562.5prime Sequence

543 bp (519 high quality bases) assembled on 2007-04-13

> MXO02562.5prime
CAGTCGACATGACTAATTCATTGACCATCGCCGTCTTTTTGGCCAGCCTG
TGCCTCTTTGCCAGTTGTGGTCAAATGCAGGCAGCCTCCATTGTCTGCGG
ATCGGAGGCTAAGTCTGCAGAGGATGGTGATTCGGTGACCACTCCCAGTA
CCAGTGAGGTCAACAAATTCGTCCACAGCCTGCAATGCACTCTGGAGAAG
GCCAAGCCCTGGATAGCCAATATCGAGAAGGAGGCCAAGATCTTGGAGGA
GAAGGCCAGGGATGCCACCATATCGCTCTTCCAGCGCATAAATAAACTGG
TCAATGTGCTCGCCTCACCGGTTAAATTCGAAAAGGATAAGGAAAAGGAT
AAGGATGAGCAGAAGGAACCGGAGGAGGTCACCACCACGACCACCCCTTC
CACATCGGAGGCTTCGAGTTCCTCCAAAAACGATCTTAAGGAGGAACTAA
CCACTTCTGCGCCGCCAGTTCACTTGGACTGGCTGGAGGATCATGCCAAT
GAGGTGGACTACATTCCAGAGAAGAATGCAAGCTTTCTAGACC

MXO02562.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG5915-PA 624 Rab7-RA 1..621 9..629 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG9689-RB 688 CG9689-RB 76..594 9..527 2595 100 Plus
CG9689-RA 1655 CG9689-RA 76..594 9..527 2595 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9882028..9882546 9..527 2595 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:31:08 has no hits.

MXO02562.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:55 Download gff for MXO02562.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5915-PA 1..624 9..633 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:55 Download gff for MXO02562.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 68..594 1..527 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:14:58 Download gff for MXO02562.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 68..594 1..527 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:14:58 Download gff for MXO02562.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9882020..9882546 1..527 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:55 Download gff for MXO02562.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9776053..9776579 1..527 99   Plus