MXO02568.5prime Sequence
837 bp (785 high quality bases) assembled on 2007-04-13
> MXO02568.5prime
CAGTCGACATGCAGTCACATCTCATCGCCATCCTGCTGGCCACCGTGGCC
ATTGGCTCCTGCATCGCGAATCCCAACCTCATCTCTGGTCCTTCGCGAAT
TCTTGAGATAATGAGCGCCACCAGTGATATCCAGCGTAATAATCCACAAC
TGACCGTAGAATGTTTTGACTACTATAATGACGTATTCAAAACCGAGTAT
GCGGAGTATGTGGATGAGTACAATCTGTGCGTCGATAAGTATGATGGCGG
TTATGAACAGGTTCTGGAACAGTACAATTCCGTTGTCTGGGACCTCAGCA
ATTCCACCTTCGAATCCTGCATGTTCCTGCTGGACTGCGATAAACAGAAT
AACAGCGAAAATGCTCTATCCTGCTACTCCACTGAGGGTCCGACATATTC
CAAGCAGTTGTCGAATGTGGCAGCCAATGCTTCGGTCTCGGTCAGTTCAC
TGCGTCAGCAGGTCGAAACACTGGTGTTCACCCGTGACCAATGCTGTTCT
GCAACGTCCAGGAACTATGAGATCCGCTCCGGCGAGTCCTACGAAGATCT
TCAGAAGTGCCTGAGCGGTGAGAATCCTGTGCCGGAAAGAAGCACCACCA
CTACCAGTTCCAGCTCCAGCTCCAGCACCAGCACCACCGCCGCCAACCCC
ACTACTACCACCACGACCCCATCTCCTTCAACCACCACCTCATCGTCTTC
CACCTCCTCAACAACGAGATCTCCATCGACAGTTGCGCATTTTAGTTCCG
TTGAAAACAGCAGTGGCAACAGCCAGCACCGATTTCCAAGAAGACTGGAC
AATATTTTTCAACATATTCTTGCAAGCTTTCTAGACC
MXO02568.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10540-PA | 861 | CG10540-RA | 1..850 | 9..858 | 4250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10912-RA | 910 | CG10912-RA | 35..849 | 7..821 | 4045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18056125..18056561 | 821..385 | 2155 | 99.5 | Minus |
| 2R | 25286936 | 2R | 18056651..18057031 | 387..7 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:14 has no hits.
MXO02568.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:57 Download gff for
MXO02568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10540-PA | 1..849 | 9..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:26:58 Download gff for
MXO02568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 29..857 | 1..830 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:03 Download gff for
MXO02568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 29..857 | 1..830 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:03 Download gff for
MXO02568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18056117..18056559 | 387..830 | 98 | <- | Minus |
| 2R | 18056652..18057035 | 1..386 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:26:58 Download gff for
MXO02568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13943622..13944064 | 387..830 | 98 | <- | Minus |
| arm_2R | 13944157..13944540 | 1..386 | 99 | | Minus |
