MXO02569.5prime Sequence
855 bp (773 high quality bases) assembled on 2007-04-13
> MXO02569.5prime
CAGTCGACATGACCATCCAAGGACTGAAGTGTGACCTCAGCCCGACGGTG
ACCACTTGTCTGCAGCTGAAGGACTGCGTCCGTCCGGACTGCTGTCCCAT
CCGGGACCCCATTCCCTACGATGCCGAGTGCTTCGTTAGGGACATTGGCC
AGGAGCTGGACAAACTGACGCGCCGACACGAGCGCATGTTCGTCAAGCGG
CGGCGTCTGATGGAAATGGCCATACCCAGGCGACGCACCTGCCGCTTTGT
GCCGAAATGCGCCTGCTCATTTCCCAAGTCCATCGAGATGGTGCGACCAT
GTGACGCCCAGAATCACACACGCACCGAGCAACTAGCTCTGCCCACGGTC
CGTCGATTGCTTCACAGGCGGCGAACGGCCATTCTGGCGGGCGACTCAAT
TGGGGAGTCCATACTGAACAGATGGCTTCGCTACAGCTATCTATCGCTGT
ACAGTCGTCTCACGAATATCCAGCCGTTGGTTAAGCCGAAGAAAAAGAAG
AAGAAGACGGAGAAGCAGCTGGCTAAGCACGAGAAGTACATCGAAAAGTT
GGCGAAACCAAAGAAAGCACCAAAGGTCCCGAAACCGGATCGTGGAGCTG
GGGAGTTCGATCCCGTGCGTCTCAATCAGCTGGCCAGTCCCAAGGCCTAT
TTGGAGGAGATCAAACCCAAGTGGGAGCTGACCTCCCAGATGAAGGACTA
CAAGGCGACCAAGCGGATCAAGCAAATATCGCAGCCCGTCGTGCGCGATA
ATGTCCACATCAACGAGAATCCGGAGAAAGTCTCGCCCAATGCCCTTCGC
TACAAGCCGAGTGCCCGCATCAAGGAGATGTCCGAGCCACTTACCACGCG
CGATG
MXO02569.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8055-PA | 681 | CG8055-RA | 1..678 | 9..686 | 3340 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6332-RA | 1316 | CG6332-RA | 132..978 | 9..855 | 4220 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22014828..22015307 | 9..488 | 2400 | 100 | Plus |
| 3R | 32079331 | 3R | 22015540..22015760 | 587..807 | 1090 | 99.5 | Plus |
| 3R | 32079331 | 3R | 22015380..22015480 | 488..588 | 505 | 100 | Plus |
| 3R | 32079331 | 3R | 22015827..22015874 | 808..855 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:26 has no hits.
MXO02569.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:58 Download gff for
MXO02569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8055-PA | 1..681 | 9..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:04 Download gff for
MXO02569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6332-RA | 126..978 | 1..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:54 Download gff for
MXO02569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6332-RA | 126..978 | 1..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:54 Download gff for
MXO02569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22014822..22015306 | 1..487 | 99 | -> | Plus |
| 3R | 22015380..22015479 | 488..587 | 100 | -> | Plus |
| 3R | 22015541..22015760 | 588..807 | 99 | -> | Plus |
| 3R | 22015827..22015874 | 808..855 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:04 Download gff for
MXO02569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17840544..17841028 | 1..487 | 99 | -> | Plus |
| arm_3R | 17841102..17841201 | 488..587 | 100 | -> | Plus |
| arm_3R | 17841263..17841482 | 588..807 | 99 | -> | Plus |
| arm_3R | 17841549..17841596 | 808..855 | 100 | | Plus |
