MXO02570.5prime Sequence
720 bp (19 high quality bases) assembled on 2007-04-13
> MXO02570.5prime
CAATCGACATGCATTGGTATGCCTTCCTCCAAGGATTCCTCCTGGGAATA
TCATCAATAATCATTTTATGGGTACAAGGAGTCGTTGGCTTGCCATTGGC
TACAACCGATCTGGAGTCACTTCCAATCGACTTGGCACAGGATGTTCCGA
GTGGAGAGAGCTCCAAGGCAAGTAAAACCAGATCCGTCGACTTTCTATAT
TTTCAAGGTGGATCAAAGCTCCAATAACCAAATGCAACAGAAATCCAACG
GCTTCAGAGTGTTCGCAAAGAAACTACAGGATGATTATCACCGTACAGCT
GGCTACAATGAAACTAATCCGCCACCAGTTACTGTGACCCGAGGAAGCAC
TACTGCTCCTAAAAAAATCCATACAAGTGGCATTCGACTATTTGCTTCTC
CACAAGATCCACCTCCACCTGAAGCTGCGGCGCCAGCTGATGGAGCTCCA
GCGGCGGCAGGAGCGGATGAAGGAGGTGCCGCCGGAGGAAAAGGAACTGA
ACCACCCAAAGAGCTGACCGTCAGTATTCAACAATTCGTTACAAACCAAT
ATGGGTGAGAAGGAATACAATGCTTGGGGCGTCACTTTTGATAGACATTT
CTTCGACACCCGTATCGCCGTATCTAGGCATGAAATACCTCAAATAACTG
TGGATCCGACACCGGTCCGTAATAACAATCCAAAAATGGACAATCTGACC
ACCGTCAGCTTGAACAGATC
MXO02570.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8974-PC | 834 | CG8974-RC | 1..831 | 9..839 | 4155 | 100 | Plus |
| CG8974-PA | 834 | CG8974-RA | 1..831 | 9..839 | 4155 | 100 | Plus |
| CG8974-PB | 834 | CG8974-RB | 1..831 | 9..839 | 4155 | 100 | Plus |
| CG8974-PD | 834 | CG8974-RD | 1..831 | 9..839 | 4155 | 100 | Plus |
| CG8974-PE | 834 | CG8974-RE | 1..831 | 9..839 | 4155 | 100 | Plus |
| CG32581-PA | 675 | CG32581-RA | 1..544 | 9..552 | 2695 | 99.8 | Plus |
| CG32581-PA | 675 | CG32581-RA | 545..675 | 575..705 | 655 | 100 | Plus |
| CG32847-PB | 495 | CG32847-RB | 44..119 | 373..448 | 155 | 88.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11018-RA | 1250 | CG11018-RA | 108..817 | 9..720 | 3165 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19662650..19663305 | 63..720 | 2890 | 96.7 | Plus |
| 2R | 25286936 | 2R | 19662543..19662596 | 9..62 | 225 | 94.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:58 has no hits.
MXO02570.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:58 Download gff for
MXO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8974-PA | 1..834 | 9..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:23 Download gff for
MXO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 101..817 | 1..720 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:57 Download gff for
MXO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 101..817 | 1..720 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:57 Download gff for
MXO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19662650..19663305 | 63..720 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:23 Download gff for
MXO02570.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15550155..15550810 | 63..720 | 96 | | Plus |
