MXO02573.5prime Sequence
654 bp (654 high quality bases) assembled on 2007-04-13
> MXO02573.5prime
CAGTCGACATGGCGATGGAAACTATTTTGGGGATCAAGGGACCAGACTTT
GTGATGCTAGCATCAGATACAATGCAGGCCAAATCGCTGGTCTTCATGAA
AGATGACCAATCAAAAATCCACCGACTATCAGACTTCAATATGATGGCCA
CGGTGGGTGATGGTGGCGATACCATTCAGTTCACCGACTTCATATCCAAA
AATTTGCATCTGTACAAGATTTCCCACGGATACCATCTAAGTGCGAAGTC
AGCTGCCCATTTTACCAGGAAAACACTGGCGGATTATATAAGGACCAACA
CCAGATACCAGGTGGCAATGCTCCTGGCAGGATACGATGCGGTTGAGGGA
CCTGACCTCCACTACATCGACTCCTATGGCGCTGCTCAGTCAATCAATCA
TGCAGGTCATGGTTGGGGCAGCATGTTCTGTGGCAGCATTCTGCAGAGAT
ATTGGAACTCGAAGCTCAGCCAAGAGGATGCCTACTCGCTGATGAAGAAG
TGCGTCCTGGAGATCCAAAGGCGACTGATCATCAACCAGCGGAACTTTGA
GGTGTATGTAGTGGACAGCAAGGGAATGCGCAAGATGGAGGCCATCAATC
CAGGATCCCTAAACAAGGAGTCGATAAGCCTGAGTTGGGCAAGCTTTCTA
GACC
MXO02573.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7425-PA | 444 | eff-RA | 1..365 | 9..373 | 1800 | 99.7 | Plus |
| CG7425-PA | 444 | eff-RA | 409..441 | 419..451 | 140 | 96.9 | Plus |
| CG7425-PA | 444 | eff-RA | 382..408 | 391..417 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta4R2-RB | 1647 | CG17302-RB | 66..696 | 8..638 | 3155 | 100 | Plus |
| Prosbeta4R2-RA | 757 | CG17302-RA | 66..696 | 8..638 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2655618..2656151 | 105..638 | 2670 | 100 | Plus |
| 2L | 23513712 | 2L | 2655459..2655556 | 8..105 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:45 has no hits.
MXO02573.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:00 Download gff for
MXO02573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7425-PA | 1..444 | 9..454 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:33 Download gff for
MXO02573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R2-RA | 66..702 | 8..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:21 Download gff for
MXO02573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R2-RA | 66..702 | 8..644 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:21 Download gff for
MXO02573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2655459..2655556 | 8..105 | 100 | -> | Plus |
| 2L | 2655619..2656157 | 106..644 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:33 Download gff for
MXO02573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2655459..2655556 | 8..105 | 100 | -> | Plus |
| arm_2L | 2655619..2656157 | 106..644 | 99 | | Plus |
