MXO02574.5prime Sequence
682 bp (439 high quality bases) assembled on 2007-04-13
> MXO02574.5prime
CAGTCGACTTGAGGGATCGCGACCGCCGTGACTGATATCGCGACAGAGAG
AGGGTATAGAGATCGGGACCGAGAAAGAGACAGAGAGCGAGACCGCGACA
GACGACACAGATCAAAGTCGCCCGGCAGGAGCAGCCGGCAGGTTTCAAAA
CCGAAGAGGAAAAAGGGCAAGAAGTCGAAAAAGTACTCGAGAAGGAGTCG
CAGTAGCAGTCGCAGCACCTCGCGCAGCTCCTCCAGCAACGGGAGTAGTT
CCCGCAGCACGCACAGCAAAAGCAGAACCTGGGATCATCACAAATCGCGG
TCTATTTCGCAGAGGAAAACCAGGGGTCCTGGTTCGGAAAGCTTTTCCCG
ATCCGCAACCACACCCGCAGCTGCTCCCGTGAAGGCCATCGATCTGTTCG
ACACCAAGGTGCAAAAGGCACTCGAGACTATAGACGAGGACACCTTCAAG
CCGGAGTCATTTTTTAGCTCCAGGGATTCAAAGGAGACATCCGATAAGGT
GATCATAGATCTGAACAATGAAACGGTCACAGTCGACAGCAAGCCAGCCA
CTGCTGTCCGAGACGAAGATGTAATATTCCATCCGAACTTCCTGGGCGAC
CCGGATATGAAGGCCGAGAAGTGGCTGCGCAAGCTGTACAATTACCGCCA
AAAGTACATGCTGGAGGCAAGCTTTCTAGACC
MXO02574.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1938-PD | 1482 | Dlic2-RD | 1..809 | 9..817 | 4045 | 100 | Plus |
| CG1938-PA | 1482 | Dlic2-RA | 1..809 | 9..817 | 4045 | 100 | Plus |
| CG1938-PC | 1482 | Dlic2-RC | 1..809 | 9..817 | 4045 | 100 | Plus |
| CG1938-PB | 1197 | Dlic2-RB | 1..524 | 294..817 | 2620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11808-RA | 801 | CG11808-RA | 95..750 | 10..666 | 3020 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15216301..15216878 | 10..588 | 2620 | 97.2 | Plus |
| 2R | 25286936 | 2R | 15216942..15217019 | 589..666 | 375 | 98.7 | Plus |
Blast to na_te.dros performed 2014-11-28 20:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 5316..5352 | 145..181 | 113 | 78.4 | Plus |
MXO02574.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:00 Download gff for
MXO02574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1938-PC | 1..807 | 9..815 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:37 Download gff for
MXO02574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11808-RA | 95..750 | 10..666 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:25 Download gff for
MXO02574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11808-RA | 95..750 | 10..666 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:25 Download gff for
MXO02574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15216301..15216878 | 10..588 | 97 | -> | Plus |
| 2R | 15216942..15217019 | 589..666 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:37 Download gff for
MXO02574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11103806..11104383 | 10..588 | 97 | -> | Plus |
| arm_2R | 11104447..11104524 | 589..666 | 98 | | Plus |
