MXO02577.5prime Sequence
759 bp (759 high quality bases) assembled on 2007-04-13
> MXO02577.5prime
CAGTCGACATGGCTCTACGCGTCCAATTCGAGAACAACGACGACATCGGC
GTCTTCACTAAACTAACCAACACATACTGCCTGGTGGCCATCGGTGGATC
CGAGACCTTCTACAGCGCCTTCGAGGCGGAGCTGGGCGACACCATCCCGG
TGGTGCATGCGAATGTGGGCGGCTGCCGGATCATCGGCCGCCTCACCGTG
GGCAACCGCAACGGCCTGCTGGTGCCCAACTCCACCACCGACGAGGAGCT
GCAACACCTGCGTAACAGCCTGCCAGACGCCGTGAAGATTTATCGTGTGG
AGGAGCGCCTGTCCGCGCTGGGCAACGTTATCGCCTGCAATGATTATGTG
GCCCTGGTGCACCCGGATCTGGACAAGGAGACCGAGGAGATCATCGCGGA
CGTGCTCAAAGTAGAGGTCTTCCGCCAGACCATTGCCGACAACTCACTGG
TGGGCTCTTACGCCGTGCTGAGCAACCAGGGCGGCATGGTGCATCCCAAG
ACGAGCATTCAGGACCAGGACGAACTGTCGTCCCTGCTGCAGGTTCCCCT
CGTGGCCGGAACAGTGAACCGGGGCAGCGAAGTACTCGCCGCCGGCATGG
TCGTCAACGACTGGCTCTCCTTCGTGGGCATGAACACCACGGCCACAGAG
ATCTCCGTGATCGAGAGCGTCTTCAAGCTTAACCAGGCACAGCCCGCCAC
AGTGACGACCAAGCTGCGTGCGGCCCTCATCGAGGACATGTCCGCAAGCT
TTCTAGACC
MXO02577.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13698-PB | 951 | CG13698-RB | 1..822 | 9..830 | 4085 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 1056 | CG17611-RA | 230..964 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23849338..23850072 | 743..9 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:19:41 has no hits.
MXO02577.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:01 Download gff for
MXO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13698-PB | 1..822 | 9..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:04:22 Download gff for
MXO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 1..749 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:13 Download gff for
MXO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 1..749 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:13 Download gff for
MXO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23849333..23850080 | 1..749 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:04:22 Download gff for
MXO02577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19736856..19737603 | 1..749 | 99 | | Minus |
