MXO02579.5prime Sequence
849 bp (719 high quality bases) assembled on 2007-04-13
> MXO02579.5prime
CAGTCGACATGAGAGAAAAGTGGAAAGCTCTGTTGCTATTGCTTCAGCTG
CTTGCTCATTTGGAATCGGGTCAAGCTATTTGGTTTCCCTGGTACTTTCA
GCGCTACGGACTAGCCCCACATTCATCCCGCCATGGCGGAGGTCATAAGA
ACAACACAGACCCCGGGTCAACCTGCCCACCAGGCTACGAAATAAAGGCA
TCAGTGGCAGGATTGTCTGGCGGAACGGCCGGATGTGAACGCGTAGTTGG
ATCGAAAGCAGGACGCCTTTGCGACGATAATCCCGTGTTGATGCAACTGG
CGCGTCTCTATGTGGTGAGTCCTGAGAGGATTGTCCTGCTCCTGGCGCAG
CCATCACTAACCGAGTCCTGCGCCGAGATCACCGATGTGCTGGACAATAT
TCGGAACTCCATGCGCAATTGTGTCTTGGCACCGGATAACATATACGGAA
GACTAGCTGATGGACTGAGCTACTTCCAATCGGAGGTCTGCGTTGGTGGC
GATGGCAGCAACAGGAAGCGATGCACTGGACTCCAGGAGTCGCACAACTG
CCTCAAGGAACTCCGGACGGACATGATCGAGTGCGAGGCACCGGCTGATT
GGTACGAACGCAGGAATGCCAGCAAGGTGTGCCACATATTCAACGATGTT
CTCGACTGTTACTATACGAGGGCAGCCTTGTTGTGCGGACTTGAGGTTGC
CAGGCAACTAAGGTCCTTCGCAGGCGACAGCATGGGCAGAGCCATGATCC
ACAAGTGCGAGGTCAGCAAAAGGCTACCCCGGGTTGATAATGCCATGCCC
GTCAACGCAAGTAGTGGGGCTAGCTTAAGGTCATCATGGTTAGGTGCAC
MXO02579.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1539-PB | 1212 | tmod-RB | 1..872 | 9..880 | 4360 | 100 | Plus |
| CG1539-PD | 1320 | tmod-RD | 223..980 | 123..880 | 3790 | 100 | Plus |
| CG1539-PF | 1320 | tmod-RF | 223..980 | 123..880 | 3790 | 100 | Plus |
| CG1539-PC | 1230 | tmod-RC | 133..890 | 123..880 | 3790 | 100 | Plus |
| CG1539-PA | 1104 | tmod-RA | 7..764 | 123..880 | 3790 | 100 | Plus |
| CG1539-PE | 1320 | tmod-RE | 223..980 | 123..880 | 3790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4891-RA | 948 | CG4891-RA | 40..880 | 9..849 | 4205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16095036..16095876 | 9..849 | 4205 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1553..1591 | 23..63 | 119 | 80.5 | Plus |
MXO02579.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:02 Download gff for
MXO02579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1539-PB | 1..872 | 9..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:35 Download gff for
MXO02579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4891-RA | 40..880 | 9..849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:12 Download gff for
MXO02579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4891-RA | 40..880 | 9..849 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:12 Download gff for
MXO02579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16095036..16095876 | 9..849 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:35 Download gff for
MXO02579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16095036..16095876 | 9..849 | 100 | | Plus |
