MXO02582.5prime Sequence
570 bp (570 high quality bases) assembled on 2007-04-13
> MXO02582.5prime
CAGTCGACATGCCAACCAAGGACCGCCACATAGCCATGATGGGCTACCGA
TCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGCCAGTTCGT
GGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGATCGAGCGTG
TAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGGGCCAGGAC
GAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCACGGCTACGT
CCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGTGAAGATCA
TATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTACCTGTGGTG
TTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTTTCCACGGA
GGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCTCGAAACGT
CCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGCTACTGATC
CTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGTTGTCTTGT
ATCGGCAAGCTTTCTAGACC
MXO02582.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17323-PA | 1560 | CG17323-RA | 1..873 | 9..881 | 4315 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rheb-RB | 1059 | CG1081-RB | 137..682 | 9..554 | 2715 | 99.8 | Plus |
| Rheb-RA | 1225 | CG1081-RA | 303..848 | 9..554 | 2715 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5569575..5569782 | 130..337 | 1040 | 100 | Plus |
| 3R | 32079331 | 3R | 5569842..5569971 | 338..467 | 650 | 100 | Plus |
| 3R | 32079331 | 3R | 5570026..5570114 | 466..554 | 445 | 100 | Plus |
| 3R | 32079331 | 3R | 5569399..5569471 | 57..129 | 365 | 100 | Plus |
| 3R | 32079331 | 3R | 5569223..5569272 | 9..58 | 235 | 98 | Plus |
Blast to na_te.dros performed 2014-11-28 20:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 295..326 | 106 | 81.2 | Plus |
MXO02582.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:03 Download gff for
MXO02582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17323-PA | 1..873 | 9..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:42 Download gff for
MXO02582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rheb-RA | 296..848 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:27 Download gff for
MXO02582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rheb-RA | 296..848 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:27 Download gff for
MXO02582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5569216..5569271 | 1..57 | 91 | -> | Plus |
| 3R | 5569400..5569471 | 58..129 | 100 | -> | Plus |
| 3R | 5569575..5569782 | 130..337 | 100 | -> | Plus |
| 3R | 5569842..5569971 | 338..467 | 100 | -> | Plus |
| 3R | 5570028..5570114 | 468..554 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:42 Download gff for
MXO02582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1395564..1395693 | 338..467 | 100 | -> | Plus |
| arm_3R | 1395750..1395836 | 468..554 | 100 | | Plus |
| arm_3R | 1394938..1394993 | 1..57 | 91 | -> | Plus |
| arm_3R | 1395122..1395193 | 58..129 | 100 | -> | Plus |
| arm_3R | 1395297..1395504 | 130..337 | 100 | -> | Plus |
