MXO02583.5prime Sequence
591 bp (591 high quality bases) assembled on 2007-04-13
> MXO02583.5prime
CAGTCGACATGCTGACGAAGGCGCTTATCCTGTTCGGCCTGCTGGCCTTG
GCCCAAGGTTACAGCTTCACCTCCCGCGAGGTCAAGTGTCACGTGTGCAA
GGCCGTGGTTACGGAACTGGAGGAGGCCATTGCCAAGGAGGACCCCCACA
AGATGGCCGATGTCAGTGGATTCCGGCTGGACGCACAGGGAAATTCGATC
AGCAAGAAAGTTCGCCTAGTGAAATCTGAAATGTTCCTTACCGAACTGAT
GGAGAAGATCTGCGAAAAAATGGACGACTACTTGAAGGCAACCTACAAGA
GCAACGGGAAATTCACACTCCTCAAGATGATCATCAATGGTCAGATGAAC
CCAGACTCCTCGTTGGTTGACTTTGTGCAAGATGGTGATCTCAACAAAAG
CCTGGGGCACTTCTGCAACGAAGTACTGGAGGACAACGATGAGATCTTCG
TTAAAGCCTTCCAGGCCGAAGAGCTCGGAAACGATTTAGACATCAAGATC
TGCTCAGAACAAGCGAGCTACTGCGACGAATCGCCGGTCCAGGAGGAGTA
TGACTTTGATGGCAAAGAGGAACTGGCAAGCTTTCTAGACC
MXO02583.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12918-PA | 570 | CG12918-RA | 1..567 | 9..575 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sel-RA | 1012 | CG12918-RA | 282..848 | 9..575 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10051026..10051339 | 575..262 | 1570 | 100 | Minus |
| 2R | 25286936 | 2R | 10051533..10051702 | 262..93 | 850 | 100 | Minus |
| 2R | 25286936 | 2R | 10051802..10051886 | 93..9 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:30:35 has no hits.
MXO02583.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:04 Download gff for
MXO02583.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12918-PA | 1..570 | 9..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:28 Download gff for
MXO02583.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sel-RA | 282..854 | 9..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:10 Download gff for
MXO02583.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sel-RA | 282..854 | 9..584 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:10 Download gff for
MXO02583.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10051020..10051339 | 262..584 | 98 | <- | Minus |
| 2R | 10051534..10051701 | 94..261 | 100 | <- | Minus |
| 2R | 10051802..10051886 | 9..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:28 Download gff for
MXO02583.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5938525..5938844 | 262..584 | 98 | <- | Minus |
| arm_2R | 5939039..5939206 | 94..261 | 100 | <- | Minus |
| arm_2R | 5939307..5939391 | 9..93 | 100 | | Minus |
