MXO02584.5prime Sequence
792 bp (773 high quality bases) assembled on 2007-04-13
> MXO02584.5prime
CAGTCGACATGTCGCACTTGCTGAGGCGCACCAAGAAGTCCTGTCTGAAG
TTCCTGCGCAAGATATCGACTTCAAAGCAGCTCTTTGTCCAGCGGCTGGA
CGAGGAGGACGGGGACGACGAGGAGGTGGAGGAGGAGCTCAACCTGCAGC
GAGATCTGGAGCTGGATGTGAACAGCAACTGTCCGGTGACGGAGGCCATC
TACGAAGAGCTGCAGCTGAGCGAGTGCAACCAGGCCTTGGACTTGGCCAC
CTCCAAGGAGGTGGAGGTGGAGGAACTGCAGCCAGCGGCCAAGCATGACC
TGCGCACCAAATACATGATGAGCTGCGGCAACTACGAGGTGTTGGACACA
CCACTAACGACCTTCGAGTTCGAGCGGGTGAAATACAAGGCGAATGTACG
CTACCTGCGGCACACGCCCTCCAATTCCAGTCTGGATCTGCAGCTGGAGG
AACAGAAGGAGGAGCAGCCAGAGCAGCAGCAGCAGCAGCAGGCTACTCCG
CGGAAACAGCAAGTGCTGCAGCAGGCAACTCCTAGGAAACAACAAGTGCA
GCAAAGGATTCCCACGCCCAGCCGCTACCATCCCTGCAGTATCAGCCTGG
GCTCCAAGCTGGAGGGCAACTACCACAGCGTGGTGATCATGGAGCCACCG
CACGACGACTTCCCCATTGTTAAGTGGGACATCAACGGGAACTCCCTGGA
CGACGACGCCTGCGATCGCTGGGATGACTTCGAAGCCAGGTGGCGGCAGG
CGGCGGCGGCCACCAGATCCCTCTCCCCGTCGCAAAAGTCCA
MXO02584.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11191-PA | 912 | CG11191-RA | 1..784 | 9..792 | 3870 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11191-RB | 1459 | CG11191-RB | 156..940 | 8..792 | 3895 | 99.7 | Plus |
| CG11191-RA | 1300 | CG11191-RA | 156..940 | 8..792 | 3895 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8001009..8001752 | 792..49 | 3690 | 99.7 | Minus |
| 2R | 25286936 | 2R | 8001923..8001965 | 50..8 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:19 has no hits.
MXO02584.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:05 Download gff for
MXO02584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-PA | 1..783 | 9..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:48 Download gff for
MXO02584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-RA | 150..939 | 1..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:21 Download gff for
MXO02584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-RA | 150..939 | 1..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:21 Download gff for
MXO02584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8001010..8001750 | 51..791 | 99 | <- | Minus |
| 2R | 8001923..8001971 | 1..50 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:48 Download gff for
MXO02584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3888515..3889255 | 51..791 | 99 | <- | Minus |
| arm_2R | 3889428..3889476 | 1..50 | 94 | | Minus |
