MXO02586.5prime Sequence
672 bp (672 high quality bases) assembled on 2007-04-13
> MXO02586.5prime
CAGTCGACATGGTGGCCTCGGCGCAGCGCGGGGATCGAGAGTGTCACGTT
GTGGTGCTCCTTGAAGACGATATGGTCGAGTGGGATGAAGAGTTTCCGCC
TCAGATGGGCGAGGAGTATTGTCAGACCGTGCACAGCACTGCCATGCACC
GATTCTTCAAGTACATCGAGAACCGCGATGTGGCCAAACAGGTGATGAAG
GATCGCGGTCTGAAGAAGATACGCTGTGGCATAGAGGGATACCCCACCCA
CAAAGAGAAGATCCGAAGGCGTCCCGGTGGACGGGCTGAAGTCATCTACA
GCTATGTGCAGCGACCTTTCATCCACATGTCCTGGGAGAAGGAGGAAGCA
AAGAGTCGCCATGTTGATTTCCAATGTGTAAAATCCAAGTCTGTAACGAA
TCTAGCGGAAGCAAATGCAGATCCGCCACTGGAATTGGACGCAAGTGGAA
ATCCGATTCCCCCTATAGCAGTGGCTAATCCGCATCCCAATAACGCTGAG
CTCGCTGCCGGTATGGCCGTCGCACCCGCAGCTATAGGCGTGGCTGGTCC
AGCAGTCGTGGTAGCCGTCGACGAGGCGGCCGGGGGCGTTGTAATGCTCA
ACGAGTTGGACCAGGCAGCGATCGCTGTTGCCGTCGGAATAGTTGATGAA
AATATGGCAAGCTTTCTAGACC
MXO02586.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5014-PB | 810 | Vap-33-1-RB | 1..807 | 9..815 | 4010 | 99.8 | Plus |
| CG5014-PC | 810 | Vap-33-1-RC | 1..807 | 9..815 | 4010 | 99.8 | Plus |
| CG5014-PD | 717 | Vap-33-1-RD | 1..714 | 102..815 | 3545 | 99.8 | Plus |
| CG5014-PA | 708 | Vap-33-1-RA | 1..401 | 9..409 | 1980 | 99.7 | Plus |
| CG5014-PA | 708 | Vap-33-1-RA | 393..705 | 503..815 | 1565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mri-RE | 1736 | CG1216-RE | 964..1612 | 8..656 | 3245 | 100 | Plus |
| mri-RA | 1739 | CG1216-RA | 967..1615 | 8..656 | 3245 | 100 | Plus |
| mri-RB | 1647 | CG1216-RB | 875..1523 | 8..656 | 3245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 201441..201761 | 127..447 | 1605 | 100 | Plus |
| 3L | 28110227 | 3L | 201817..202028 | 445..656 | 1060 | 100 | Plus |
| 3L | 28110227 | 3L | 201250..201368 | 8..126 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:18 has no hits.
MXO02586.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:06 Download gff for
MXO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5014-PC | 1..810 | 9..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:10 Download gff for
MXO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mri-RB | 875..1523 | 8..656 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:17 Download gff for
MXO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mri-RB | 875..1523 | 8..656 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:17 Download gff for
MXO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 201250..201368 | 8..126 | 100 | -> | Plus |
| 3L | 201441..201758 | 127..444 | 100 | -> | Plus |
| 3L | 201817..202028 | 445..656 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:10 Download gff for
MXO02586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 201250..201368 | 8..126 | 100 | -> | Plus |
| arm_3L | 201441..201758 | 127..444 | 100 | -> | Plus |
| arm_3L | 201817..202028 | 445..656 | 100 | | Plus |
