MXO02587.5prime Sequence
435 bp (435 high quality bases) assembled on 2007-04-13
> MXO02587.5prime
CAGTCGACATGAGCAAGCCTTTGTCCTTCATCTCGATGGTGGCCGTGATT
TTGCTGGCCAGCTCCACAGTGAAGTTGGCCCAAGGAACGCTCTGCAGTGA
AAAGCTCAACGAGGTGCTGAGTATGGTGTGCGAGGAGTATAATCCCGTGA
TTCCACACAAGCGCGCCATGCCCGGTGCCGACAGCGATCTGGACGCCCTC
AATCCCCTGCAGTTTGTCCAGGAGTTCGAGGAGGAGGATAACTCGATATC
GGAACCGCTGCGAAGTGCCCTCTTTCCTGGGAGCTATCTTGGGGGTGTAC
TCAATTCCCTGGCTGAAGTCCGGAGGCGAACTCGCCAACGGCAAGGAATC
GTGGAGAGGTGCTGCAAAAAGTCCTGTGATATGAAGGCTCTGCGGGAGTA
CTGCTCCGTGGTCAGAAATGCAAGCTTTCTAGACC
MXO02587.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:10:40 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp2-RA | 670 | CG8167-RA | 66..477 | 8..419 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9800000..9800247 | 172..419 | 1240 | 100 | Plus |
| 3L | 28110227 | 3L | 9799763..9799926 | 8..171 | 820 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| diver2 | 4917 | diver2 DIVER2 4917bp | 4108..4145 | 185..222 | 109 | 76.3 | Plus |
MXO02587.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:52 Download gff for
MXO02587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp2-RA | 60..482 | 1..425 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:38 Download gff for
MXO02587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp2-RA | 60..482 | 1..425 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:38 Download gff for
MXO02587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9800000..9800252 | 172..425 | 98 | | Plus |
| 3L | 9799757..9799926 | 1..171 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:52 Download gff for
MXO02587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9792857..9793026 | 1..171 | 97 | -> | Plus |
| arm_3L | 9793100..9793352 | 172..425 | 98 | | Plus |
