MXO02590.5prime Sequence
375 bp (375 high quality bases) assembled on 2007-04-13
> MXO02590.5prime
CAGTCGACATGGACGTGGATTCTGGTGTTCCAAGATGTTCCATTCGGCTC
CTTTCTACGCTCAGGATCAAGGACAAGCCAAATCAGTTAAATATCTTATC
TAGTTGGAAACACTCACTCGTACACAAACGCTTGCATACTTATAGCTGTA
GAAATATAACCCATACCAATATCAGTAACTACACCCACACCCACAACCAC
AGCCACAGCCACACCGATCGAAGATCAAGTCAGAATTCAAAAGGGAAAAC
CAACAGCAGTAGTATGAATACAAAAAGCAACAGACAGAAGTTTCCTTTGG
CGACAATTTCGAATTGTTTTTCCCATAAGCTCGAACTTGAACTCGAACTC
AAACTACAAGCAAGCTTTCTAGACC
MXO02590.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1515-PA | 600 | l(1)G0155-RA | 1..597 | 9..605 | 2960 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11509-RA | 742 | CG11509-RA | 213..563 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1652533..1652883 | 9..359 | 1755 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS | 5142 | BS BS 5142bp | 1932..1984 | 183..236 | 114 | 70.4 | Plus |
MXO02590.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:07 Download gff for
MXO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1515-PA | 1..600 | 9..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:25 Download gff for
MXO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11509-RA | 209..566 | 1..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:56 Download gff for
MXO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11509-RA | 209..566 | 1..363 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:56 Download gff for
MXO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1652529..1652886 | 1..363 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:25 Download gff for
MXO02590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1546562..1546919 | 1..363 | 98 | | Plus |
