MXO02591.5prime Sequence
896 bp (820 high quality bases) assembled on 2007-04-13
> MXO02591.5prime
CAGTCGACATGAATCTCTATTTGTTGTGTGTTTTAATTTTAAGCGGTGGC
AGCCTCTTGTCTACTGCTCAAAGCAATAAATTGGATCTAGTCTATAAGAA
AGCTGAAAGCATGGTTTCCAGTTTAAAGATCAGGCTGGAAGAGCTAAAAC
AGAGCTACAAGGAAATCACAGAAGAAAGAGGCAGTCATGAGACAATTAAC
CCATCCTCCTGTCTAGCTGCCGGAATCAACAGTAATGGCATCCATGTTAT
TGAAGTTCCGGGTCTGGAACCTTTTCCGGTTTATTGTGACACTCGGCTGG
CGGGATCTGGATGGACTGTAATTCAGCGACGACAGGATGGCAGTGAAAAC
TTCTATCGCTGTTGGGAGGAGTATAGCCAAGGATTTGGGGAGCTTAGCGG
AGAATTCTTTATGGGTCTGGAAAAGCTACACTTCCTAACAACCGCGGAGC
CTTACGAGCTGTTTGTCTATATGGAAGATTTCAATGGAGTGGTACATGAT
GCTCGATACGAGGATTTTGCCATTGGGAATGCATCAGCGTCCTATGCGCT
ATCTGTTTTGGGTAAATACTCGGGAGACGCCGGTGATTCGTTAAGGTACC
ACAAGGGAATGCCCTTCTCCACATTCGATCACGATGATACGGGTCACGGA
TGCGCCAGGATTTATGTGGGGGCCTGGTGGTATGATCAGTGCCAGAGGAG
CAACCTCAATGGCCAATATTTGGAAGGAGGTCGATTCGAGCCGAAGATGT
CGGGTCGTGGAATCACCTGGATGAGCTGGCGTGGCTACGACTACGGCTAC
AAATTCGTACAAATGATGATCAGACCCAAGTGTTCCAACAACCTACGAGG
GCAGGGCATGCAAAATGCCTTAACGCCCATGCAAGCTTTCTAGACC
MXO02591.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8293-PA | 1497 | Iap2-RA | 1..781 | 9..789 | 3905 | 100 | Plus |
| CG8293-PB | 1497 | Iap2-RB | 1..781 | 9..789 | 3905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30281-RA | 1007 | CG30281-RA | 14..887 | 8..880 | 4330 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22115325..22115832 | 193..700 | 2540 | 100 | Plus |
| 2R | 25286936 | 2R | 22115887..22116061 | 699..873 | 860 | 99.4 | Plus |
| 2R | 25286936 | 2R | 22115010..22115123 | 8..121 | 570 | 100 | Plus |
| 2R | 25286936 | 2R | 22115171..22115248 | 115..192 | 375 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:27:45 has no hits.
MXO02591.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:07 Download gff for
MXO02591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8293-PB | 1..780 | 9..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:43 Download gff for
MXO02591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30281-RA | 8..893 | 1..888 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:04 Download gff for
MXO02591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30281-RA | 8..893 | 1..888 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:04 Download gff for
MXO02591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22115004..22115123 | 1..121 | 96 | -> | Plus |
| 2R | 22115178..22115248 | 122..192 | 100 | -> | Plus |
| 2R | 22115325..22115832 | 193..700 | 100 | -> | Plus |
| 2R | 22115889..22116075 | 701..888 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:43 Download gff for
MXO02591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18002509..18002628 | 1..121 | 96 | -> | Plus |
| arm_2R | 18002683..18002753 | 122..192 | 100 | -> | Plus |
| arm_2R | 18003394..18003580 | 701..888 | 96 | | Plus |
| arm_2R | 18002830..18003337 | 193..700 | 100 | -> | Plus |
