MXO02595.5prime Sequence
756 bp (703 high quality bases) assembled on 2007-04-13
> MXO02595.5prime
CAGTCGACATGAAGGACCTGCACGGCTCCTTGGACACTCTGGAGAATGCC
CGCTTCAACTACGTGTATATGAAGGACATTGCTCGCCTGGCAAAGGACTC
GATCTTCTCGCATAACGAGCTGATTAGCATTGTAATGCTCTACCATAAGT
TTGTGCTGGTCAATGGGCCGAGAGCAAAGTACATGACCATTCAGCAACTC
TCTGCGCTGATGGAGCTCTTGTTTGAGATCGTGGATCGCGATCTCATTGC
GACCATTGTGTATAGAATAGCCCATACACCAGGTTCCAGGCCTCCTGACT
TCTTTTCCGACAAGCATATACACTTGGAGTCCTTTGTGCGGCTTTTCACC
GTATACTTCACCAAACATCTTCAGCTGAAAATGGAATTCGCATTCTCGGT
CTACGATAAAAGCGATTCCAAGCAGTTGAATGGCGAGCAAGTTGGGTTCT
TCGTCGGCAAGTTCTTTGAGAGCGAGGATGAAGACGAATCCATTGAGCTG
CGCTTGGACATGAAGGAGATGCTGTTCCTCAAATTCGACTTGGACAAGGA
TACCAACATTGGGGTTGATGAGTACTACGAGGTGGTCCGCCGACAGCCCA
TGCTGCTGGAGTGCTTTGGTCGCGTGTTTCCCCCGAATCCCCAGATGGAG
GTCCTTGCGCTGTGCGCCAATGTAATGTCTTGGTTTGACGATTCGCCCAA
TCCCAGGATTATGATAAAACCAGACGGCGGCAAGGCCAGCGCAAGCTTTC
TAGACC
MXO02595.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13626-PA | 1188 | Syx18-RA | 1..799 | 9..807 | 3895 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3565-RA | 899 | CG3565-RA | 46..782 | 4..740 | 3640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24602517..24602913 | 4..400 | 1940 | 99.2 | Plus |
| 2R | 25286936 | 2R | 24603137..24603371 | 506..740 | 1175 | 100 | Plus |
| 2R | 25286936 | 2R | 24602968..24603077 | 398..507 | 550 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:07:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dhet\Uhu | 1658 | Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). | 755..788 | 518..551 | 107 | 79.4 | Plus |
MXO02595.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:09 Download gff for
MXO02595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13626-PA | 1..799 | 9..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:52 Download gff for
MXO02595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3565-RA | 43..787 | 1..747 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:38 Download gff for
MXO02595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3565-RA | 43..787 | 1..747 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:38 Download gff for
MXO02595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24602514..24602911 | 1..398 | 98 | -> | Plus |
| 2R | 24602969..24603076 | 399..506 | 100 | -> | Plus |
| 2R | 24603138..24603376 | 507..747 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:52 Download gff for
MXO02595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20490037..20490434 | 1..398 | 98 | -> | Plus |
| arm_2R | 20490492..20490599 | 399..506 | 100 | -> | Plus |
| arm_2R | 20490661..20490899 | 507..747 | 98 | | Plus |
