MXO02602.5prime Sequence
860 bp (619 high quality bases) assembled on 2007-04-10
> MXO02602.5prime
CAGTCGACATGAAATCCTGGTACCTAGCACTCAGCCTGCTGCTCCTCGCC
GCATCCACAATTCAGCCCACTGACGCTCGTGGCGGAAGGGGGCGTGGCGG
CGGCTCATTTGGCGGACTCTTTGGCGGTTGGCGCAAGTACAAGAAGCCCT
CGTCGTCGGGCGGTGGTCGGCGGGTGGTGAGCGGTTCGCCAGTTCACACG
GCCATGACGGTGCCGAAACCACCACCGCCTCCGCCGGCACCACCAAAGAT
GCCCATGATGCCGCCCAAGCAGCAAATCCCCAGCTATCCTCGCCAGCAGA
TGCCACCTGGCTATGGCTTTGGATCGTATCCGGGCCAAGGCAGTGGAACG
TACTACGCCAATGCCCAGGCCCTGCCAGCGGGAGCGGTTTACTATGCCCA
ACCACCCGTCGGAATGAATCGAGGAATCGGTACAGGAGATTTCCTCACCG
GAATGCTGGCGGGTCACATGATGAACAACGTTCTGTTTGGCCACCGACAC
CATACGTACCATAGAAATCCGGAGGAGGGCCAGTCGTCGCCCCAGGGAAA
TGGTCGACAGATCATCATCGTCAACAATGGTCAGCAGGAGGGAGTTTTGC
ACAATGAGACCACTATTTCAGGAGAATCCTCCGCAGTGGTCCCCCCGGAA
AATCCCCTAACGGAGGAGGATGACGTAGAGGGGCAGGGCGAAGGTGACGG
AGGAAGTGAAGCTGTTTCCAGTGAGGAATCCACGGAATCGGAGGCAACTC
CTCAGCCCTATCCAGATGGTGGCATCATTTGCTTTCCCATCATGCTAAAC
GAAACAAATCCCGAAAACTCGGAGGTGATGCGAGAAGTGGAACGGGTCGT
TTGCTTTTCA
MXO02602.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-PA | 1056 | CG31706-RA | 1..849 | 9..857 | 4220 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1625 | CG31706-RB | 59..907 | 9..857 | 4230 | 99.9 | Plus |
| CG31706-RA | 1139 | CG31706-RA | 59..907 | 9..857 | 4230 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11529756..11530184 | 857..429 | 2130 | 99.8 | Minus |
| 2L | 23513712 | 2L | 11530572..11530994 | 431..9 | 2115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:26 has no hits.
MXO02602.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:10 Download gff for
MXO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-PA | 1..850 | 9..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:01 Download gff for
MXO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..908 | 1..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:41 Download gff for
MXO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..908 | 1..859 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:41 Download gff for
MXO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11529754..11530183 | 430..859 | 99 | <- | Minus |
| 2L | 11530574..11531002 | 1..429 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:01 Download gff for
MXO02602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11529754..11530183 | 430..859 | 99 | <- | Minus |
| arm_2L | 11530574..11531002 | 1..429 | 99 | | Minus |
