MXO02603.5prime Sequence
843 bp (669 high quality bases) assembled on 2007-04-10
> MXO02603.5prime
CAGTCGACATGAATAAACTGTTGAATATAGCCCAGGCAGGGCATCGGCAG
TTTGTCCGGGAATATGCATTCAAGTCGGACCTGAAAATCAAATGGATGCG
CCCCGAGAAGATCGCGTGCTATAAGCCCGAAAAGAGCGGCGATTTAGCCA
AGCTGCCTCCTCTGAAAGCCGACGAACTGCTGCCGGAATACAGGGACTGC
AAGGAGTTGGATAAAGCCGACGAGTCAGTTAAATCCTTGTTCAAACTGAG
CAACAACGCTAGTTACCTGACCACAAAATTCTATCGCGATGAGATGGTCA
AGGAGGTGCAAAGACATGCCCAGGATTTCGGCTCAATGGAGGCCAAATTG
GCAAAAATGACTGCAGTTATCCGCCGCTACCAGGAGCACATGGACAAGCA
TCCGCGCGACAAGATGATCAAGGTGCGTCTCAAGGAGCTCATCGACAAAC
GCAAGAAGTTCCTCAAGTACTTGAGACGTTGGGATTATCCCCGCTTCGAG
TGGATTCTCGAGAAACTCGACCTGGTGTACAAGCCACCGCCCACACATTT
CCACTGGATCACCCGCAAGGAATCCCTCCAAAAGTTGACCGACATATACT
GCGAAAACCTAAAGGAAGAGCGGCTAGAGGCTTACCATAAGCAGCTGCAG
GCCCAGCAAATACCCTTCCTTGAGGAGGCCATCAAGAAGATGCAGTTCGT
GCGGCAGGAACAGATTTCCTGCGATGTCCCCGTGACCGTGACAGAAGAGA
AGATCGCCGACTCAAAAAGGCAGCTGGAAATGCTGAAGGAGCTGCAGCAG
GCGGAGGCAGCCGCCAGCAGCAAGAAACAAAACGAGGATGGCT
MXO02603.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4207-PA | 843 | bonsai-RA | 1..835 | 9..843 | 4175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bonsai-RA | 981 | CG4207-RA | 84..918 | 9..843 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22638311..22638805 | 349..843 | 2475 | 100 | Plus |
| 2R | 25286936 | 2R | 22637853..22638058 | 9..214 | 1030 | 100 | Plus |
| 2R | 25286936 | 2R | 22638118..22638251 | 215..348 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:41 has no hits.
MXO02603.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:11 Download gff for
MXO02603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4207-PA | 1..835 | 9..843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:31 Download gff for
MXO02603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bonsai-RA | 84..918 | 9..843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:13 Download gff for
MXO02603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bonsai-RA | 84..918 | 9..843 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:13 Download gff for
MXO02603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22637853..22638058 | 9..214 | 100 | -> | Plus |
| 2R | 22638118..22638251 | 215..348 | 100 | -> | Plus |
| 2R | 22638311..22638805 | 349..843 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:31 Download gff for
MXO02603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18525358..18525563 | 9..214 | 100 | -> | Plus |
| arm_2R | 18525623..18525756 | 215..348 | 100 | -> | Plus |
| arm_2R | 18525816..18526310 | 349..843 | 100 | | Plus |
