MXO02604.5prime Sequence
783 bp (783 high quality bases) assembled on 2007-04-10
> MXO02604.5prime
CAGTCGACATGAAGCTGACCCTCACCATTGGACTAATCCTTGTGGCCGCC
GGAGTTCTGGAGGCCCAGCCGCAGGGCAGGATCGCCGGTGGAGAAGATGC
CGTTCTCGGCCAGCTGCCCTACCAGGCGGCCCTCTCCATCGGCGGAAGCT
ACAACTGCGGCGCCGTGATCATTGGCCAGCGATACGCCCTCACCGCCCTC
TCTTGCGTCTGCTCCGACGGCAAGGATACCCCATGGGCTGCTGTTCTGTT
CGCCGTGACCGTAGGATCGGTGGATCTCTACAATGGCAAGCAGATTCGCG
TGGAGGAGATCACCATTAACCCGAACTACAGCACTCTGAAGACCGGAATC
GCCCTGCTCCGTCTGCAGGAGGAGATTACTTTCAGTGAGACAGTCAATGC
CATTCCACTCTCCCAGGACGTTCCGCCCATGGGCAGCCAGGTGGAGGTCT
CCGGCTGGGGCCGCACCACCGAGTCCGAGGTGAACATGCATCGCACCCTG
CAAATAGGAGCCGCCGAGGTGATGGCACCACGCGAATGCGCCCTGGCCAA
TCGGGATGAGCTGCTGGTGGCGGACGACCAGGTGCTGTGCCTGGGCCATG
GCCGTCGTCAGGGAATCTGCAGTGGGGACATTGGAGGACCGGCCGTCTAC
CAGGGCCAGCTGGTGGGTCTGGGTGCACAGATCCTTGGCGAGTGCGGCGG
AATGCTGCCCGAACGATTCATTAGCATTGCGGCCAACTACGATTGGATCC
AACAGCAGTTGCAGCAAGCAAGCTTTCTAGACC
MXO02604.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9672-PA | 762 | CG9672-RA | 1..759 | 9..767 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9672-RA | 813 | CG9672-RA | 30..789 | 8..767 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16705995..16706529 | 767..233 | 2675 | 100 | Minus |
| X | 23542271 | X | 16706621..16706845 | 232..8 | 1125 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:52 has no hits.
MXO02604.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:11 Download gff for
MXO02604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-PA | 1..762 | 9..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:44 Download gff for
MXO02604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-RA | 24..792 | 1..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:45 Download gff for
MXO02604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-RA | 24..792 | 1..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:45 Download gff for
MXO02604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16705991..16706529 | 233..771 | 99 | <- | Minus |
| X | 16706621..16706850 | 1..232 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:44 Download gff for
MXO02604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16600024..16600562 | 233..771 | 99 | <- | Minus |
| arm_X | 16600654..16600883 | 1..232 | 98 | | Minus |
