MXO02605.5prime Sequence
317 bp (19 high quality bases) assembled on 2007-04-10
> MXO02605.5prime
CAATCCACATGGGCGCTCCCATCGACCTGATTGCATCGGATGTACTGGAT
CATTACCGCACCTATTCCCTGATTGAACTATACCTAAACGCACCCACCAA
ACTGATGGAACAATCCTGCTTCCAGCTGGATCCACAAATGCGTGACCTTA
TCACCGATAACTACTATTCCATCGATGATGTGGTGGCTCGCTAAATTCTT
GGCAAGAAGCTGTCGTCCCGCTACCGCAAGGACCTCGACAAGGTGGCCGA
AAAGACGTGCGTCAAGCTAAAATCATTTCGCCGACAATTTGACAACGTAA
AACGCATTTTTAAGGCA
MXO02605.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:06:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8660-PD | 1194 | Fibp-RD | 246..555 | 8..317 | 1325 | 97 | Plus |
CG8660-PB | 948 | Fibp-RB | 1..309 | 9..317 | 1320 | 97 | Plus |
CG8660-PC | 948 | Fibp-RC | 1..309 | 9..317 | 1320 | 97 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fibp-RG | 1166 | CG8660-RG | 167..476 | 8..317 | 1415 | 97.1 | Plus |
Fibp-RF | 1233 | CG8660-RF | 167..476 | 8..317 | 1415 | 97.1 | Plus |
Fibp-RE | 1330 | CG8660-RE | 344..653 | 8..317 | 1415 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19817231..19817503 | 280..8 | 1230 | 96.7 | Minus |
3L | 28110227 | 3L | 19817131..19817168 | 317..280 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:48 has no hits.
MXO02605.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:11 Download gff for
MXO02605.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8660-PD | 241..554 | 1..316 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:44 Download gff for
MXO02605.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fibp-RE | 339..652 | 1..316 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:50 Download gff for
MXO02605.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fibp-RE | 339..652 | 1..316 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:50 Download gff for
MXO02605.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19817132..19817167 | 281..316 | 100 | <- | Minus |
3L | 19817231..19817508 | 1..280 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:44 Download gff for
MXO02605.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19810232..19810267 | 281..316 | 100 | <- | Minus |
arm_3L | 19810331..19810608 | 1..280 | 95 | | Minus |